RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
DDX39B-216ENST00000462421 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
DDX39B-216ENST00000462421 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
DDX39B-216ENST00000462421 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
DDX39B-216ENST00000462421 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
DDX39B-216ENST00000462421 K7ERS5 55 aa3.46□□□□□ -1.86
DDX39B-216ENST00000462421 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
DDX39B-216ENST00000462421 UQCR11O14957 56 aa3.45□□□□□ -1.86
DDX39B-216ENST00000462421 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
DDX39B-216ENST00000462421 TNP1P09430 55 aa3.44□□□□□ -1.86
DDX39B-216ENST00000462421 A8MU10 97 aa3.43□□□□□ -1.86
DDX39B-216ENST00000462421 V9GYY9 64 aa3.42□□□□□ -1.86
DDX39B-216ENST00000462421 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
DDX39B-216ENST00000462421 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
DDX39B-216ENST00000462421 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
DDX39B-216ENST00000462421 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
DDX39B-216ENST00000462421 MT1EP04732 61 aa3.3□□□□□ -1.88
DDX39B-216ENST00000462421 PSPHP1O15172 72 aa3.29□□□□□ -1.88
DDX39B-216ENST00000462421 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
DDX39B-216ENST00000462421 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
DDX39B-216ENST00000462421 A6NED7 52 aa3.27□□□□□ -1.89
DDX39B-216ENST00000462421 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
DDX39B-216ENST00000462421 PCP4P48539 62 aa3.26□□□□□ -1.89
DDX39B-216ENST00000462421 Q1T7F1 81 aa3.26□□□□□ -1.89
DDX39B-216ENST00000462421 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
DDX39B-216ENST00000462421 MT1GP13640 62 aa3.25□□□□□ -1.89
DDX39B-216ENST00000462421 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
DDX39B-216ENST00000462421 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
DDX39B-216ENST00000462421 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
DDX39B-216ENST00000462421 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
DDX39B-216ENST00000462421 MT1LQ93083 61 aa3.16□□□□□ -1.9
DDX39B-216ENST00000462421 MT1MQ8N339 61 aa3.15□□□□□ -1.91
DDX39B-216ENST00000462421 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
DDX39B-216ENST00000462421 RPS28P62857 69 aaKnown RBP3.12□□□□□ -1.91
DDX39B-216ENST00000462421 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
DDX39B-216ENST00000462421 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
DDX39B-216ENST00000462421 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
DDX39B-216ENST00000462421 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
DDX39B-216ENST00000462421 ROMO1P60602 79 aa3.07□□□□□ -1.92
DDX39B-216ENST00000462421 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
DDX39B-216ENST00000462421 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
DDX39B-216ENST00000462421 MT4P47944 62 aa3.04□□□□□ -1.92
DDX39B-216ENST00000462421 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
DDX39B-216ENST00000462421 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
DDX39B-216ENST00000462421 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
DDX39B-216ENST00000462421 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
DDX39B-216ENST00000462421 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
DDX39B-216ENST00000462421 BRK1Q8WUW1 75 aa2.86□□□□□ -1.95
DDX39B-216ENST00000462421 MT3P25713 68 aa2.82□□□□□ -1.96
DDX39B-216ENST00000462421 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
DDX39B-216ENST00000462421 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
DDX39B-216ENST00000462421 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
DDX39B-216ENST00000462421 MT1AP04731 61 aa2.72□□□□□ -1.97
DDX39B-216ENST00000462421 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
DDX39B-216ENST00000462421 PMAIP1Q13794 54 aa2.69□□□□□ -1.98
DDX39B-216ENST00000462421 PRAC1Q96KF2 57 aa2.67□□□□□ -1.98
DDX39B-216ENST00000462421 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
DDX39B-216ENST00000462421 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
DDX39B-216ENST00000462421 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
DDX39B-216ENST00000462421 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
DDX39B-216ENST00000462421 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
DDX39B-216ENST00000462421 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
DDX39B-216ENST00000462421 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
DDX39B-216ENST00000462421 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
DDX39B-216ENST00000462421 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
DDX39B-216ENST00000462421 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
DDX39B-216ENST00000462421 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
DDX39B-216ENST00000462421 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
DDX39B-216ENST00000462421 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
DDX39B-216ENST00000462421 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
DDX39B-216ENST00000462421 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
DDX39B-216ENST00000462421 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
DDX39B-216ENST00000462421 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
DDX39B-216ENST00000462421 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
DDX39B-216ENST00000462421 PRM1P04553 51 aa1.55□□□□□ -2.16
DDX39B-216ENST00000462421 INE1O15225 51 aa1.49□□□□□ -2.17
DDX39B-216ENST00000462421 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
DDX39B-216ENST00000462421 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 79.4 ms