RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 MT1EP04732 61 aa5.7□□□□□ -1.5
APP-211ENST00000462267 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
APP-211ENST00000462267 SNURFQ9Y675 71 aa5.62□□□□□ -1.51
APP-211ENST00000462267 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
APP-211ENST00000462267 MT1GP13640 62 aa5.61□□□□□ -1.51
APP-211ENST00000462267 CDC42SE1Q9NRR8 79 aa5.61□□□□□ -1.51
APP-211ENST00000462267 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
APP-211ENST00000462267 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
APP-211ENST00000462267 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
APP-211ENST00000462267 CHKB-CPT1BH3BT56 60 aa5.55□□□□□ -1.52
APP-211ENST00000462267 ACYP2P14621 99 aa5.5□□□□□ -1.53
APP-211ENST00000462267 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
APP-211ENST00000462267 A6NED7 52 aa5.47□□□□□ -1.53
APP-211ENST00000462267 MT1MQ8N339 61 aa5.47□□□□□ -1.53
APP-211ENST00000462267 A8MU10 97 aa5.45□□□□□ -1.54
APP-211ENST00000462267 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
APP-211ENST00000462267 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
APP-211ENST00000462267 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
APP-211ENST00000462267 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
APP-211ENST00000462267 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
APP-211ENST00000462267 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
APP-211ENST00000462267 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
APP-211ENST00000462267 MT1LQ93083 61 aa5.34□□□□□ -1.55
APP-211ENST00000462267 COA5Q86WW8 74 aa5.33□□□□□ -1.56
APP-211ENST00000462267 ROMO1P60602 79 aa5.31□□□□□ -1.56
APP-211ENST00000462267 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
APP-211ENST00000462267 A0A0D9SG42 100 aa5.28□□□□□ -1.56
APP-211ENST00000462267 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
APP-211ENST00000462267 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
APP-211ENST00000462267 K7ERS5 55 aa5.15□□□□□ -1.59
APP-211ENST00000462267 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
APP-211ENST00000462267 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
APP-211ENST00000462267 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
APP-211ENST00000462267 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
APP-211ENST00000462267 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
APP-211ENST00000462267 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
APP-211ENST00000462267 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
APP-211ENST00000462267 A0A1B0GU69 56 aa5.05□□□□□ -1.6
APP-211ENST00000462267 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
APP-211ENST00000462267 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
APP-211ENST00000462267 UQCR11O14957 56 aa5.03□□□□□ -1.6
APP-211ENST00000462267 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
APP-211ENST00000462267 A0A1B0GU33 70 aa5.01□□□□□ -1.61
APP-211ENST00000462267 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
APP-211ENST00000462267 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
APP-211ENST00000462267 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
APP-211ENST00000462267 SPINT4Q6UDR6 99 aa4.87□□□□□ -1.63
APP-211ENST00000462267 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
APP-211ENST00000462267 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
APP-211ENST00000462267 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
APP-211ENST00000462267 TNP1P09430 55 aa4.76□□□□□ -1.65
APP-211ENST00000462267 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
APP-211ENST00000462267 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
APP-211ENST00000462267 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
APP-211ENST00000462267 MT1AP04731 61 aa4.54□□□□□ -1.68
APP-211ENST00000462267 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
APP-211ENST00000462267 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
APP-211ENST00000462267 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
APP-211ENST00000462267 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
APP-211ENST00000462267 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
APP-211ENST00000462267 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
APP-211ENST00000462267 INE1O15225 51 aa4.22□□□□□ -1.73
APP-211ENST00000462267 MT3P25713 68 aa4.19□□□□□ -1.74
APP-211ENST00000462267 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
APP-211ENST00000462267 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
APP-211ENST00000462267 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
APP-211ENST00000462267 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
APP-211ENST00000462267 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
APP-211ENST00000462267 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
APP-211ENST00000462267 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
APP-211ENST00000462267 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
APP-211ENST00000462267 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
APP-211ENST00000462267 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
APP-211ENST00000462267 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
APP-211ENST00000462267 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
APP-211ENST00000462267 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
APP-211ENST00000462267 PRM1P04553 51 aa2.4□□□□□ -2.03
APP-211ENST00000462267 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 74.5 ms