RNA–Protein interactions for RNA: ENST00000461623.1

ABCA9-204, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5

Gene ABCA9, Length 2,172 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-204ENST00000461623 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
ABCA9-204ENST00000461623 KRTAP10-10P60014 251 aa3.1□□□□□ -1.91
ABCA9-204ENST00000461623 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
ABCA9-204ENST00000461623 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.91
ABCA9-204ENST00000461623 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
ABCA9-204ENST00000461623 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
ABCA9-204ENST00000461623 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
ABCA9-204ENST00000461623 MT1HP80294 61 aa3□□□□□ -1.93
ABCA9-204ENST00000461623 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
ABCA9-204ENST00000461623 TNP1P09430 55 aa2.97□□□□□ -1.93
ABCA9-204ENST00000461623 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
ABCA9-204ENST00000461623 FAT4Q6V0I7 4981 aa2.96□□□□□ -1.94
ABCA9-204ENST00000461623 MT2AP02795 61 aa2.95□□□□□ -1.94
ABCA9-204ENST00000461623 MT1FP04733 61 aa2.94□□□□□ -1.94
ABCA9-204ENST00000461623 M0R2T5 61 aa2.93□□□□□ -1.94
ABCA9-204ENST00000461623 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
ABCA9-204ENST00000461623 RNF213Q63HN8 5207 aa2.91□□□□□ -1.94
ABCA9-204ENST00000461623 MT1BP07438 61 aa2.85□□□□□ -1.95
ABCA9-204ENST00000461623 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
ABCA9-204ENST00000461623 NEBP20929 6669 aa2.84□□□□□ -1.96
ABCA9-204ENST00000461623 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.96
ABCA9-204ENST00000461623 MT1XP80297 61 aa2.82□□□□□ -1.96
ABCA9-204ENST00000461623 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
ABCA9-204ENST00000461623 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
ABCA9-204ENST00000461623 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
ABCA9-204ENST00000461623 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
ABCA9-204ENST00000461623 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
ABCA9-204ENST00000461623 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
ABCA9-204ENST00000461623 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
ABCA9-204ENST00000461623 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
ABCA9-204ENST00000461623 KRTAP12-4P60329 112 aa2.71□□□□□ -1.97
ABCA9-204ENST00000461623 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
ABCA9-204ENST00000461623 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
ABCA9-204ENST00000461623 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
ABCA9-204ENST00000461623 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -2
ABCA9-204ENST00000461623 KRTAP5-8O75690 187 aa2.56□□□□□ -2
ABCA9-204ENST00000461623 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
ABCA9-204ENST00000461623 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
ABCA9-204ENST00000461623 KRTAP19-7Q3SYF9 63 aa2.52□□□□□ -2.01
ABCA9-204ENST00000461623 USH2AO75445 5202 aa2.52□□□□□ -2.01
ABCA9-204ENST00000461623 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
ABCA9-204ENST00000461623 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
ABCA9-204ENST00000461623 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.01
ABCA9-204ENST00000461623 MT1EP04732 61 aa2.45□□□□□ -2.02
ABCA9-204ENST00000461623 MT1LQ93083 61 aa2.44□□□□□ -2.02
ABCA9-204ENST00000461623 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
ABCA9-204ENST00000461623 KMT2DO14686 5537 aa2.42□□□□□ -2.02
ABCA9-204ENST00000461623 FSIP2Q5CZC0 6907 aa2.36□□□□□ -2.03
ABCA9-204ENST00000461623 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.04
ABCA9-204ENST00000461623 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
ABCA9-204ENST00000461623 MT1GP13640 62 aa2.29□□□□□ -2.04
ABCA9-204ENST00000461623 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
ABCA9-204ENST00000461623 MT1MQ8N339 61 aa2.29□□□□□ -2.04
ABCA9-204ENST00000461623 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
ABCA9-204ENST00000461623 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
ABCA9-204ENST00000461623 SPRR2FQ96RM1 72 aa2.18□□□□□ -2.06
ABCA9-204ENST00000461623 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
ABCA9-204ENST00000461623 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
ABCA9-204ENST00000461623 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
ABCA9-204ENST00000461623 MT1AP04731 61 aa2.06□□□□□ -2.08
ABCA9-204ENST00000461623 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
ABCA9-204ENST00000461623 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
ABCA9-204ENST00000461623 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
ABCA9-204ENST00000461623 SPRR2EP22531 72 aa2□□□□□ -2.09
ABCA9-204ENST00000461623 SPRR2BP35325 72 aa2□□□□□ -2.09
ABCA9-204ENST00000461623 SPRR2AP35326 72 aa2□□□□□ -2.09
ABCA9-204ENST00000461623 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
ABCA9-204ENST00000461623 SPRR2DP22532 72 aa1.92□□□□□ -2.1
ABCA9-204ENST00000461623 SYNE1Q8NF91 8797 aaKnown RBP1.83□□□□□ -2.12
ABCA9-204ENST00000461623 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
ABCA9-204ENST00000461623 PRM1P04553 51 aa1.78□□□□□ -2.12
ABCA9-204ENST00000461623 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
ABCA9-204ENST00000461623 MT4P47944 62 aa1.65□□□□□ -2.15
ABCA9-204ENST00000461623 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
ABCA9-204ENST00000461623 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
ABCA9-204ENST00000461623 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
ABCA9-204ENST00000461623 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
ABCA9-204ENST00000461623 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms