RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 LINC00158P58513 81 aa0.63□□□□□ -2.31
CCT4-203ENST00000461540 LRP2P98164 4655 aa0.63□□□□□ -2.31
CCT4-203ENST00000461540 TOMM5Q8N4H5 51 aa0.63□□□□□ -2.31
CCT4-203ENST00000461540 NMES1Q9C002 83 aa0.63□□□□□ -2.31
CCT4-203ENST00000461540 FSIP2Q5CZC0 6907 aa0.62□□□□□ -2.31
CCT4-203ENST00000461540 M0QY20 66 aa0.62□□□□□ -2.31
CCT4-203ENST00000461540 CLPSL2Q6UWE3 100 aa0.62□□□□□ -2.31
CCT4-203ENST00000461540 RPL39LQ96EH5 51 aaKnown RBP0.62□□□□□ -2.31
CCT4-203ENST00000461540 MUC17Q685J3 4493 aa0.61□□□□□ -2.31
CCT4-203ENST00000461540 ETDCA0A1B0GVM5 59 aa0.61□□□□□ -2.31
CCT4-203ENST00000461540 DEFB104AQ8WTQ1 72 aa0.61□□□□□ -2.31
CCT4-203ENST00000461540 RNF213Q63HN8 5207 aa0.6□□□□□ -2.31
CCT4-203ENST00000461540 POLR2KP53803 58 aaKnown RBP0.6□□□□□ -2.31
CCT4-203ENST00000461540 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.31
CCT4-203ENST00000461540 RPL39P62891 51 aaKnown RBP0.59□□□□□ -2.31
CCT4-203ENST00000461540 MT1HP80294 61 aa0.59□□□□□ -2.31
CCT4-203ENST00000461540 SERF2P84101 59 aa0.59□□□□□ -2.31
CCT4-203ENST00000461540 TMEM167BQ9NRX6 74 aa0.59□□□□□ -2.31
CCT4-203ENST00000461540 C6orf48Q9UBA6 75 aa0.59□□□□□ -2.31
CCT4-203ENST00000461540 FAT4Q6V0I7 4981 aa0.59□□□□□ -2.32
CCT4-203ENST00000461540 MUC2Q02817 5179 aa0.58□□□□□ -2.32
CCT4-203ENST00000461540 SMIM27A0A1W2PRY6 76 aa0.57□□□□□ -2.32
CCT4-203ENST00000461540 LINC01546A6NGU7 62 aa0.57□□□□□ -2.32
CCT4-203ENST00000461540 IGIPA6NJ69 53 aa0.57□□□□□ -2.32
CCT4-203ENST00000461540 SMIM2Q9BVW6 85 aa0.57□□□□□ -2.32
CCT4-203ENST00000461540 PRLHP81277 87 aa0.56□□□□□ -2.32
CCT4-203ENST00000461540 MT2AP02795 61 aa0.55□□□□□ -2.32
CCT4-203ENST00000461540 MT1FP04733 61 aa0.55□□□□□ -2.32
CCT4-203ENST00000461540 NDUFA1O15239 70 aa0.54□□□□□ -2.32
CCT4-203ENST00000461540 FCER1GP30273 86 aa0.54□□□□□ -2.32
CCT4-203ENST00000461540 H0YAA0 97 aa0.53□□□□□ -2.32
CCT4-203ENST00000461540 K7EMI3 77 aa0.53□□□□□ -2.32
CCT4-203ENST00000461540 RPS29P62273 56 aaKnown RBP0.53□□□□□ -2.32
CCT4-203ENST00000461540 KRTAP19-6Q3LI70 58 aa0.53□□□□□ -2.32
CCT4-203ENST00000461540 SSPOA2VEC9 5147 aa0.52□□□□□ -2.33
CCT4-203ENST00000461540 M0R2T5 61 aa0.52□□□□□ -2.33
CCT4-203ENST00000461540 TOMM7Q9P0U1 55 aa0.52□□□□□ -2.33
CCT4-203ENST00000461540 USH2AO75445 5202 aa0.51□□□□□ -2.33
CCT4-203ENST00000461540 IGLV5-48A0A075B6I7 105 aa0.51□□□□□ -2.33
CCT4-203ENST00000461540 C9orf92A6NGG3 77 aa0.51□□□□□ -2.33
CCT4-203ENST00000461540 MT1BP07438 61 aa0.51□□□□□ -2.33
CCT4-203ENST00000461540 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
CCT4-203ENST00000461540 LINC00308Q8TCZ7 52 aa0.5□□□□□ -2.33
CCT4-203ENST00000461540 KRTAP19-8Q3LI54 63 aa0.48□□□□□ -2.33
CCT4-203ENST00000461540 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
CCT4-203ENST00000461540 PRM1P04553 51 aa0.47□□□□□ -2.33
CCT4-203ENST00000461540 PLNP26678 52 aa0.47□□□□□ -2.33
CCT4-203ENST00000461540 SPRR2GQ9BYE4 73 aa0.47□□□□□ -2.33
CCT4-203ENST00000461540 NEBP20929 6669 aa0.47□□□□□ -2.33
CCT4-203ENST00000461540 MT1XP80297 61 aa0.46□□□□□ -2.34
CCT4-203ENST00000461540 KRTAP20-1Q3LI63 56 aa0.46□□□□□ -2.34
CCT4-203ENST00000461540 MMP24-AS1A0A0U1RRL7 71 aa0.45□□□□□ -2.34
CCT4-203ENST00000461540 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
CCT4-203ENST00000461540 KMT2DO14686 5537 aa0.44□□□□□ -2.34
CCT4-203ENST00000461540 SPRR2EP22531 72 aa0.42□□□□□ -2.34
CCT4-203ENST00000461540 SPRR2BP35325 72 aa0.42□□□□□ -2.34
CCT4-203ENST00000461540 SPRR2AP35326 72 aa0.42□□□□□ -2.34
CCT4-203ENST00000461540 KRTAP19-7Q3SYF9 63 aa0.42□□□□□ -2.34
CCT4-203ENST00000461540 SPRR2FQ96RM1 72 aa0.42□□□□□ -2.34
CCT4-203ENST00000461540 H0YGX0 51 aa0.4□□□□□ -2.35
CCT4-203ENST00000461540 MT1EP04732 61 aa0.4□□□□□ -2.35
CCT4-203ENST00000461540 SPRR2DP22532 72 aa0.4□□□□□ -2.35
CCT4-203ENST00000461540 KRTAP8-1Q8IUC2 63 aa0.39□□□□□ -2.35
CCT4-203ENST00000461540 MT1MQ8N339 61 aa0.39□□□□□ -2.35
CCT4-203ENST00000461540 MUC12Q9UKN1 5478 aa0.39□□□□□ -2.35
CCT4-203ENST00000461540 MT1LQ93083 61 aa0.38□□□□□ -2.35
CCT4-203ENST00000461540 S4R3F8 94 aa0.38□□□□□ -2.35
CCT4-203ENST00000461540 MT4P47944 62 aa0.37□□□□□ -2.35
CCT4-203ENST00000461540 KRTAP20-2Q3LI61 65 aa0.37□□□□□ -2.35
CCT4-203ENST00000461540 KRTAP19-5Q3LI72 72 aa0.36□□□□□ -2.35
CCT4-203ENST00000461540 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
CCT4-203ENST00000461540 MT1GP13640 62 aa0.35□□□□□ -2.35
CCT4-203ENST00000461540 M0QZ58 72 aa0.34□□□□□ -2.36
CCT4-203ENST00000461540 KRTAP6-1Q3LI64 71 aa0.33□□□□□ -2.36
CCT4-203ENST00000461540 DSTQ03001 7570 aaKnown RBP0.33□□□□□ -2.36
CCT4-203ENST00000461540 MT1AP04731 61 aa0.31□□□□□ -2.36
CCT4-203ENST00000461540 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
CCT4-203ENST00000461540 TNP1P09430 55 aa0.25□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 115.4 ms