RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
CHRD-209ENST00000461120 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
CHRD-209ENST00000461120 TNP1P09430 55 aa5.3□□□□□ -1.56
CHRD-209ENST00000461120 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
CHRD-209ENST00000461120 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
CHRD-209ENST00000461120 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
CHRD-209ENST00000461120 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
CHRD-209ENST00000461120 KRTAP5-7Q6L8G8 165 aa5.17□□□□□ -1.58
CHRD-209ENST00000461120 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
CHRD-209ENST00000461120 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
CHRD-209ENST00000461120 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
CHRD-209ENST00000461120 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
CHRD-209ENST00000461120 ROMO1P60602 79 aa5.11□□□□□ -1.59
CHRD-209ENST00000461120 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
CHRD-209ENST00000461120 MT1EP04732 61 aa5.1□□□□□ -1.59
CHRD-209ENST00000461120 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
CHRD-209ENST00000461120 MT4P47944 62 aa4.98□□□□□ -1.61
CHRD-209ENST00000461120 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
CHRD-209ENST00000461120 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
CHRD-209ENST00000461120 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
CHRD-209ENST00000461120 MT1LQ93083 61 aa4.93□□□□□ -1.62
CHRD-209ENST00000461120 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
CHRD-209ENST00000461120 MT1GP13640 62 aa4.9□□□□□ -1.63
CHRD-209ENST00000461120 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
CHRD-209ENST00000461120 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
CHRD-209ENST00000461120 MT1MQ8N339 61 aa4.83□□□□□ -1.64
CHRD-209ENST00000461120 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
CHRD-209ENST00000461120 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
CHRD-209ENST00000461120 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
CHRD-209ENST00000461120 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
CHRD-209ENST00000461120 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
CHRD-209ENST00000461120 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
CHRD-209ENST00000461120 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
CHRD-209ENST00000461120 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
CHRD-209ENST00000461120 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
CHRD-209ENST00000461120 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
CHRD-209ENST00000461120 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
CHRD-209ENST00000461120 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
CHRD-209ENST00000461120 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
CHRD-209ENST00000461120 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
CHRD-209ENST00000461120 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
CHRD-209ENST00000461120 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
CHRD-209ENST00000461120 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
CHRD-209ENST00000461120 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
CHRD-209ENST00000461120 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
CHRD-209ENST00000461120 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
CHRD-209ENST00000461120 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
CHRD-209ENST00000461120 MT1AP04731 61 aa4.2□□□□□ -1.74
CHRD-209ENST00000461120 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
CHRD-209ENST00000461120 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
CHRD-209ENST00000461120 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
CHRD-209ENST00000461120 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
CHRD-209ENST00000461120 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
CHRD-209ENST00000461120 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
CHRD-209ENST00000461120 MT3P25713 68 aa3.82□□□□□ -1.8
CHRD-209ENST00000461120 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CHRD-209ENST00000461120 H3BS24 57 aa3.74□□□□□ -1.81
CHRD-209ENST00000461120 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
CHRD-209ENST00000461120 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
CHRD-209ENST00000461120 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
CHRD-209ENST00000461120 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CHRD-209ENST00000461120 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
CHRD-209ENST00000461120 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
CHRD-209ENST00000461120 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
CHRD-209ENST00000461120 INE1O15225 51 aa3.22□□□□□ -1.89
CHRD-209ENST00000461120 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
CHRD-209ENST00000461120 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
CHRD-209ENST00000461120 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
CHRD-209ENST00000461120 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
CHRD-209ENST00000461120 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
CHRD-209ENST00000461120 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
CHRD-209ENST00000461120 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
CHRD-209ENST00000461120 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
CHRD-209ENST00000461120 PRM1P04553 51 aa2.64□□□□□ -1.99
CHRD-209ENST00000461120 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CHRD-209ENST00000461120 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CHRD-209ENST00000461120 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
CHRD-209ENST00000461120 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms