RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
APTX-209ENST00000460940 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
APTX-209ENST00000460940 INE1O15225 51 aa4.61□□□□□ -1.67
APTX-209ENST00000460940 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
APTX-209ENST00000460940 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
APTX-209ENST00000460940 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
APTX-209ENST00000460940 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
APTX-209ENST00000460940 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
APTX-209ENST00000460940 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
APTX-209ENST00000460940 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
APTX-209ENST00000460940 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
APTX-209ENST00000460940 KMT2DO14686 5537 aa4.37□□□□□ -1.71
APTX-209ENST00000460940 TNP1P09430 55 aa4.37□□□□□ -1.71
APTX-209ENST00000460940 NEBP20929 6669 aa4.36□□□□□ -1.71
APTX-209ENST00000460940 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
APTX-209ENST00000460940 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
APTX-209ENST00000460940 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
APTX-209ENST00000460940 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
APTX-209ENST00000460940 SPRR2EP22531 72 aa4.22□□□□□ -1.73
APTX-209ENST00000460940 SPRR2BP35325 72 aa4.22□□□□□ -1.73
APTX-209ENST00000460940 SPRR2AP35326 72 aa4.22□□□□□ -1.73
APTX-209ENST00000460940 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
APTX-209ENST00000460940 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
APTX-209ENST00000460940 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
APTX-209ENST00000460940 MT1EP04732 61 aa4.11□□□□□ -1.75
APTX-209ENST00000460940 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
APTX-209ENST00000460940 SPRR2DP22532 72 aa4.09□□□□□ -1.76
APTX-209ENST00000460940 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.76
APTX-209ENST00000460940 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
APTX-209ENST00000460940 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
APTX-209ENST00000460940 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
APTX-209ENST00000460940 MT1GP13640 62 aa3.96□□□□□ -1.77
APTX-209ENST00000460940 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
APTX-209ENST00000460940 MT1LQ93083 61 aa3.96□□□□□ -1.78
APTX-209ENST00000460940 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
APTX-209ENST00000460940 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
APTX-209ENST00000460940 MT1MQ8N339 61 aa3.89□□□□□ -1.79
APTX-209ENST00000460940 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.8
APTX-209ENST00000460940 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
APTX-209ENST00000460940 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
APTX-209ENST00000460940 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
APTX-209ENST00000460940 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
APTX-209ENST00000460940 MT4P47944 62 aa3.54□□□□□ -1.84
APTX-209ENST00000460940 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
APTX-209ENST00000460940 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
APTX-209ENST00000460940 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
APTX-209ENST00000460940 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
APTX-209ENST00000460940 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
APTX-209ENST00000460940 MT1AP04731 61 aa3.38□□□□□ -1.87
APTX-209ENST00000460940 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
APTX-209ENST00000460940 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
APTX-209ENST00000460940 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
APTX-209ENST00000460940 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
APTX-209ENST00000460940 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
APTX-209ENST00000460940 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
APTX-209ENST00000460940 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
APTX-209ENST00000460940 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
APTX-209ENST00000460940 MT3P25713 68 aa3.09□□□□□ -1.92
APTX-209ENST00000460940 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
APTX-209ENST00000460940 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
APTX-209ENST00000460940 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
APTX-209ENST00000460940 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
APTX-209ENST00000460940 PRM1P04553 51 aa2.92□□□□□ -1.94
APTX-209ENST00000460940 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
APTX-209ENST00000460940 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
APTX-209ENST00000460940 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
APTX-209ENST00000460940 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
APTX-209ENST00000460940 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
APTX-209ENST00000460940 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
APTX-209ENST00000460940 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
APTX-209ENST00000460940 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
APTX-209ENST00000460940 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
APTX-209ENST00000460940 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
APTX-209ENST00000460940 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
APTX-209ENST00000460940 PHGR1C9JFL3 82 aa2□□□□□ -2.09
APTX-209ENST00000460940 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
APTX-209ENST00000460940 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
APTX-209ENST00000460940 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 49.4 ms