RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
LSG1-204ENST00000460584 SERP2Q8N6R1 65 aa3.97□□□□□ -1.77
LSG1-204ENST00000460584 K7ERU9 68 aa3.96□□□□□ -1.78
LSG1-204ENST00000460584 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
LSG1-204ENST00000460584 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
LSG1-204ENST00000460584 PCP4P48539 62 aa3.91□□□□□ -1.78
LSG1-204ENST00000460584 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
LSG1-204ENST00000460584 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
LSG1-204ENST00000460584 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
LSG1-204ENST00000460584 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
LSG1-204ENST00000460584 TNP1P09430 55 aa3.86□□□□□ -1.79
LSG1-204ENST00000460584 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
LSG1-204ENST00000460584 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
LSG1-204ENST00000460584 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
LSG1-204ENST00000460584 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
LSG1-204ENST00000460584 H7BZZ5 65 aa3.8□□□□□ -1.8
LSG1-204ENST00000460584 A8MU10 97 aa3.78□□□□□ -1.8
LSG1-204ENST00000460584 A0A1B0GU69 56 aa3.77□□□□□ -1.81
LSG1-204ENST00000460584 COX7CP15954 63 aa3.77□□□□□ -1.81
LSG1-204ENST00000460584 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
LSG1-204ENST00000460584 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
LSG1-204ENST00000460584 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
LSG1-204ENST00000460584 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
LSG1-204ENST00000460584 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
LSG1-204ENST00000460584 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
LSG1-204ENST00000460584 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
LSG1-204ENST00000460584 LINC01558Q9Y6Z2 57 aa3.57□□□□□ -1.84
LSG1-204ENST00000460584 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
LSG1-204ENST00000460584 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
LSG1-204ENST00000460584 UQCR11O14957 56 aa3.5□□□□□ -1.85
LSG1-204ENST00000460584 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
LSG1-204ENST00000460584 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
LSG1-204ENST00000460584 ANAPC13Q9BS18 74 aa3.46□□□□□ -1.86
LSG1-204ENST00000460584 MT1AP04731 61 aa3.45□□□□□ -1.86
LSG1-204ENST00000460584 V9GYY9 64 aa3.45□□□□□ -1.86
LSG1-204ENST00000460584 CCDC179H3BU77 68 aa3.42□□□□□ -1.86
LSG1-204ENST00000460584 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
LSG1-204ENST00000460584 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
LSG1-204ENST00000460584 MIR22HGQ0VDD5 57 aa3.38□□□□□ -1.87
LSG1-204ENST00000460584 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
LSG1-204ENST00000460584 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
LSG1-204ENST00000460584 K7ERS5 55 aa3.34□□□□□ -1.87
LSG1-204ENST00000460584 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
LSG1-204ENST00000460584 TMEM258P61165 79 aa3.32□□□□□ -1.88
LSG1-204ENST00000460584 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
LSG1-204ENST00000460584 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
LSG1-204ENST00000460584 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
LSG1-204ENST00000460584 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
LSG1-204ENST00000460584 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
LSG1-204ENST00000460584 Q1T7F1 81 aa3.18□□□□□ -1.9
LSG1-204ENST00000460584 MT3P25713 68 aa3.16□□□□□ -1.9
LSG1-204ENST00000460584 PSPHP1O15172 72 aa3.15□□□□□ -1.91
LSG1-204ENST00000460584 CDC42SE1Q9NRR8 79 aa3.15□□□□□ -1.91
LSG1-204ENST00000460584 RPS28P62857 69 aaKnown RBP3.13□□□□□ -1.91
LSG1-204ENST00000460584 ROMO1P60602 79 aa3.1□□□□□ -1.91
LSG1-204ENST00000460584 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
LSG1-204ENST00000460584 A6NED7 52 aa3.03□□□□□ -1.92
LSG1-204ENST00000460584 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
LSG1-204ENST00000460584 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
LSG1-204ENST00000460584 KTN1-AS1Q86SY8 53 aa2.85□□□□□ -1.95
LSG1-204ENST00000460584 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
LSG1-204ENST00000460584 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
LSG1-204ENST00000460584 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
LSG1-204ENST00000460584 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
LSG1-204ENST00000460584 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
LSG1-204ENST00000460584 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
LSG1-204ENST00000460584 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
LSG1-204ENST00000460584 LCE1FQ5T754 118 aa2.54□□□□□ -2
LSG1-204ENST00000460584 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
LSG1-204ENST00000460584 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
LSG1-204ENST00000460584 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
LSG1-204ENST00000460584 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
LSG1-204ENST00000460584 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
LSG1-204ENST00000460584 INE1O15225 51 aa2.11□□□□□ -2.07
LSG1-204ENST00000460584 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
LSG1-204ENST00000460584 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
LSG1-204ENST00000460584 PRM1P04553 51 aa1.54□□□□□ -2.16
LSG1-204ENST00000460584 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms