RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-203ENST00000460483 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
SMNDC1-203ENST00000460483 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
SMNDC1-203ENST00000460483 KRTAP8-1Q8IUC2 63 aa4.34□□□□□ -1.71
SMNDC1-203ENST00000460483 ROMO1P60602 79 aa4.32□□□□□ -1.72
SMNDC1-203ENST00000460483 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
SMNDC1-203ENST00000460483 MT3P25713 68 aa4.28□□□□□ -1.72
SMNDC1-203ENST00000460483 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
SMNDC1-203ENST00000460483 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
SMNDC1-203ENST00000460483 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
SMNDC1-203ENST00000460483 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
SMNDC1-203ENST00000460483 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
SMNDC1-203ENST00000460483 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
SMNDC1-203ENST00000460483 NEBP20929 6669 aa4.15□□□□□ -1.74
SMNDC1-203ENST00000460483 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
SMNDC1-203ENST00000460483 KMT2DO14686 5537 aa4.12□□□□□ -1.75
SMNDC1-203ENST00000460483 SPRR2EP22531 72 aa4.07□□□□□ -1.76
SMNDC1-203ENST00000460483 SPRR2BP35325 72 aa4.07□□□□□ -1.76
SMNDC1-203ENST00000460483 SPRR2AP35326 72 aa4.07□□□□□ -1.76
SMNDC1-203ENST00000460483 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
SMNDC1-203ENST00000460483 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
SMNDC1-203ENST00000460483 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
SMNDC1-203ENST00000460483 MT1EP04732 61 aa4.04□□□□□ -1.76
SMNDC1-203ENST00000460483 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
SMNDC1-203ENST00000460483 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
SMNDC1-203ENST00000460483 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
SMNDC1-203ENST00000460483 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
SMNDC1-203ENST00000460483 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
SMNDC1-203ENST00000460483 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
SMNDC1-203ENST00000460483 MT1GP13640 62 aa3.97□□□□□ -1.77
SMNDC1-203ENST00000460483 SPRR2DP22532 72 aa3.94□□□□□ -1.78
SMNDC1-203ENST00000460483 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
SMNDC1-203ENST00000460483 MT1LQ93083 61 aa3.92□□□□□ -1.78
SMNDC1-203ENST00000460483 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.79
SMNDC1-203ENST00000460483 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
SMNDC1-203ENST00000460483 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
SMNDC1-203ENST00000460483 MT1MQ8N339 61 aa3.82□□□□□ -1.8
SMNDC1-203ENST00000460483 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
SMNDC1-203ENST00000460483 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
SMNDC1-203ENST00000460483 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
SMNDC1-203ENST00000460483 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
SMNDC1-203ENST00000460483 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
SMNDC1-203ENST00000460483 SVIPQ8NHG7 77 aa3.72□□□□□ -1.81
SMNDC1-203ENST00000460483 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
SMNDC1-203ENST00000460483 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
SMNDC1-203ENST00000460483 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
SMNDC1-203ENST00000460483 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
SMNDC1-203ENST00000460483 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
SMNDC1-203ENST00000460483 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
SMNDC1-203ENST00000460483 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
SMNDC1-203ENST00000460483 MT4P47944 62 aa3.38□□□□□ -1.87
SMNDC1-203ENST00000460483 MT1AP04731 61 aa3.37□□□□□ -1.87
SMNDC1-203ENST00000460483 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
SMNDC1-203ENST00000460483 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
SMNDC1-203ENST00000460483 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
SMNDC1-203ENST00000460483 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
SMNDC1-203ENST00000460483 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
SMNDC1-203ENST00000460483 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
SMNDC1-203ENST00000460483 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
SMNDC1-203ENST00000460483 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
SMNDC1-203ENST00000460483 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
SMNDC1-203ENST00000460483 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
SMNDC1-203ENST00000460483 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
SMNDC1-203ENST00000460483 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
SMNDC1-203ENST00000460483 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
SMNDC1-203ENST00000460483 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
SMNDC1-203ENST00000460483 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
SMNDC1-203ENST00000460483 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SMNDC1-203ENST00000460483 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
SMNDC1-203ENST00000460483 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
SMNDC1-203ENST00000460483 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
SMNDC1-203ENST00000460483 INE1O15225 51 aa2.54□□□□□ -2
SMNDC1-203ENST00000460483 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
SMNDC1-203ENST00000460483 PRM1P04553 51 aa2.18□□□□□ -2.06
SMNDC1-203ENST00000460483 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
SMNDC1-203ENST00000460483 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
SMNDC1-203ENST00000460483 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
SMNDC1-203ENST00000460483 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 55.5 ms