RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
ABCD4-202ENST00000460308 LCE5AQ5TCM9 118 aa7.8□□□□□ -1.16
ABCD4-202ENST00000460308 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.18
ABCD4-202ENST00000460308 MT1GP13640 62 aa7.7□□□□□ -1.18
ABCD4-202ENST00000460308 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
ABCD4-202ENST00000460308 MT1LQ93083 61 aa7.63□□□□□ -1.19
ABCD4-202ENST00000460308 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
ABCD4-202ENST00000460308 DSTQ03001 7570 aaKnown RBP7.56□□□□□ -1.2
ABCD4-202ENST00000460308 MT1MQ8N339 61 aa7.55□□□□□ -1.2
ABCD4-202ENST00000460308 CDC42SE1Q9NRR8 79 aa7.52□□□□□ -1.21
ABCD4-202ENST00000460308 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
ABCD4-202ENST00000460308 ROMO1P60602 79 aa7.4□□□□□ -1.22
ABCD4-202ENST00000460308 KRTAP4-3Q9BYR4 195 aa7.35□□□□□ -1.23
ABCD4-202ENST00000460308 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
ABCD4-202ENST00000460308 KRTAP19-4Q3LI73 84 aa7.19□□□□□ -1.26
ABCD4-202ENST00000460308 KRTAP15-1Q3LI76 137 aa7.19□□□□□ -1.26
ABCD4-202ENST00000460308 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
ABCD4-202ENST00000460308 LCE4AQ5TA78 99 aa7.14□□□□□ -1.27
ABCD4-202ENST00000460308 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
ABCD4-202ENST00000460308 MT4P47944 62 aa7.04□□□□□ -1.28
ABCD4-202ENST00000460308 LCE1DQ5T752 114 aa7.04□□□□□ -1.28
ABCD4-202ENST00000460308 KRTAP5-4Q6L8H1 288 aa7.01□□□□□ -1.29
ABCD4-202ENST00000460308 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
ABCD4-202ENST00000460308 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
ABCD4-202ENST00000460308 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
ABCD4-202ENST00000460308 HMCN1Q96RW7 5635 aa6.86□□□□□ -1.31
ABCD4-202ENST00000460308 KRTAP5-5Q701N2 237 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-202ENST00000460308 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
ABCD4-202ENST00000460308 GPR98Q8WXG9 6306 aa6.74□□□□□ -1.33
ABCD4-202ENST00000460308 KRTAP12-4P60329 112 aa6.7□□□□□ -1.34
ABCD4-202ENST00000460308 SPRR5A0A1B0GTR4 108 aa6.63□□□□□ -1.35
ABCD4-202ENST00000460308 PMAIP1Q13794 54 aa6.62□□□□□ -1.35
ABCD4-202ENST00000460308 KRTAP20-2Q3LI61 65 aa6.62□□□□□ -1.35
ABCD4-202ENST00000460308 SYNE1Q8NF91 8797 aaKnown RBP6.62□□□□□ -1.35
ABCD4-202ENST00000460308 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
ABCD4-202ENST00000460308 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
ABCD4-202ENST00000460308 MT1AP04731 61 aa6.51□□□□□ -1.37
ABCD4-202ENST00000460308 KRTAP6-1Q3LI64 71 aa6.45□□□□□ -1.38
ABCD4-202ENST00000460308 KRTAP5-10Q6L8G5 202 aa6.39□□□□□ -1.39
ABCD4-202ENST00000460308 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
ABCD4-202ENST00000460308 PRAC1Q96KF2 57 aa6.28□□□□□ -1.4
ABCD4-202ENST00000460308 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
ABCD4-202ENST00000460308 KRTAP9-4Q9BYQ2 154 aa6.27□□□□□ -1.41
ABCD4-202ENST00000460308 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
ABCD4-202ENST00000460308 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
ABCD4-202ENST00000460308 KRTAP5-7Q6L8G8 165 aa6.11□□□□□ -1.43
ABCD4-202ENST00000460308 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
ABCD4-202ENST00000460308 MT3P25713 68 aa5.98□□□□□ -1.45
ABCD4-202ENST00000460308 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
ABCD4-202ENST00000460308 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
ABCD4-202ENST00000460308 KRTAP5-8O75690 187 aa5.76□□□□□ -1.49
ABCD4-202ENST00000460308 H3BS24 57 aa5.53□□□□□ -1.52
ABCD4-202ENST00000460308 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
ABCD4-202ENST00000460308 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
ABCD4-202ENST00000460308 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
ABCD4-202ENST00000460308 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
ABCD4-202ENST00000460308 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
ABCD4-202ENST00000460308 MUC5BQ9HC84 5762 aaPredicted RBP5.33□□□□□ -1.56
ABCD4-202ENST00000460308 AHNAKQ09666 5890 aaKnown RBP5.32□□□□□ -1.56
ABCD4-202ENST00000460308 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
ABCD4-202ENST00000460308 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
ABCD4-202ENST00000460308 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
ABCD4-202ENST00000460308 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
ABCD4-202ENST00000460308 LCE1CQ5T751 118 aa5□□□□□ -1.61
ABCD4-202ENST00000460308 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
ABCD4-202ENST00000460308 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
ABCD4-202ENST00000460308 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
ABCD4-202ENST00000460308 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
ABCD4-202ENST00000460308 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
ABCD4-202ENST00000460308 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
ABCD4-202ENST00000460308 KRTAP21-2Q3LI59 83 aa4.22□□□□□ -1.73
ABCD4-202ENST00000460308 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
ABCD4-202ENST00000460308 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
ABCD4-202ENST00000460308 PRM1P04553 51 aa3.79□□□□□ -1.8
ABCD4-202ENST00000460308 INE1O15225 51 aa3.63□□□□□ -1.83
ABCD4-202ENST00000460308 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
ABCD4-202ENST00000460308 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
ABCD4-202ENST00000460308 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms