RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PRO0628Q9UI54 55 aa5.88□□□□□ -1.47
SDF4-204ENST00000459994 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
SDF4-204ENST00000459994 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
SDF4-204ENST00000459994 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
SDF4-204ENST00000459994 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
SDF4-204ENST00000459994 MT1EP04732 61 aa5.77□□□□□ -1.49
SDF4-204ENST00000459994 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
SDF4-204ENST00000459994 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
SDF4-204ENST00000459994 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
SDF4-204ENST00000459994 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
SDF4-204ENST00000459994 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
SDF4-204ENST00000459994 KRTAP12-3P60328 96 aa5.65□□□□□ -1.5
SDF4-204ENST00000459994 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
SDF4-204ENST00000459994 MT1GP13640 62 aa5.53□□□□□ -1.52
SDF4-204ENST00000459994 MT1LQ93083 61 aa5.51□□□□□ -1.53
SDF4-204ENST00000459994 MT1MQ8N339 61 aa5.5□□□□□ -1.53
SDF4-204ENST00000459994 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
SDF4-204ENST00000459994 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
SDF4-204ENST00000459994 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
SDF4-204ENST00000459994 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
SDF4-204ENST00000459994 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
SDF4-204ENST00000459994 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
SDF4-204ENST00000459994 MT4P47944 62 aa5.37□□□□□ -1.55
SDF4-204ENST00000459994 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
SDF4-204ENST00000459994 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
SDF4-204ENST00000459994 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
SDF4-204ENST00000459994 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
SDF4-204ENST00000459994 HMCN1Q96RW7 5635 aa5.28□□□□□ -1.56
SDF4-204ENST00000459994 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
SDF4-204ENST00000459994 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
SDF4-204ENST00000459994 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
SDF4-204ENST00000459994 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.59
SDF4-204ENST00000459994 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
SDF4-204ENST00000459994 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
SDF4-204ENST00000459994 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
SDF4-204ENST00000459994 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
SDF4-204ENST00000459994 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
SDF4-204ENST00000459994 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
SDF4-204ENST00000459994 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
SDF4-204ENST00000459994 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
SDF4-204ENST00000459994 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
SDF4-204ENST00000459994 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SDF4-204ENST00000459994 MT1AP04731 61 aa4.71□□□□□ -1.66
SDF4-204ENST00000459994 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
SDF4-204ENST00000459994 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
SDF4-204ENST00000459994 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
SDF4-204ENST00000459994 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
SDF4-204ENST00000459994 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
SDF4-204ENST00000459994 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
SDF4-204ENST00000459994 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
SDF4-204ENST00000459994 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
SDF4-204ENST00000459994 MT3P25713 68 aa4.29□□□□□ -1.72
SDF4-204ENST00000459994 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
SDF4-204ENST00000459994 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
SDF4-204ENST00000459994 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
SDF4-204ENST00000459994 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
SDF4-204ENST00000459994 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
SDF4-204ENST00000459994 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.74
SDF4-204ENST00000459994 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
SDF4-204ENST00000459994 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
SDF4-204ENST00000459994 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
SDF4-204ENST00000459994 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
SDF4-204ENST00000459994 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
SDF4-204ENST00000459994 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
SDF4-204ENST00000459994 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
SDF4-204ENST00000459994 INE1O15225 51 aa3.48□□□□□ -1.85
SDF4-204ENST00000459994 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
SDF4-204ENST00000459994 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SDF4-204ENST00000459994 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
SDF4-204ENST00000459994 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SDF4-204ENST00000459994 H3BS24 57 aa3.09□□□□□ -1.91
SDF4-204ENST00000459994 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
SDF4-204ENST00000459994 PRM1P04553 51 aa3.08□□□□□ -1.92
SDF4-204ENST00000459994 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SDF4-204ENST00000459994 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
SDF4-204ENST00000459994 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SDF4-204ENST00000459994 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SDF4-204ENST00000459994 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 102.1 ms