RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
HDLBP-228ENST00000459788 MT1GP13640 62 aa3.67□□□□□ -1.82
HDLBP-228ENST00000459788 ATP5EP56381 51 aaPredicted RBP3.65□□□□□ -1.83
HDLBP-228ENST00000459788 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
HDLBP-228ENST00000459788 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
HDLBP-228ENST00000459788 PRR15LQ9BU68 103 aa3.63□□□□□ -1.83
HDLBP-228ENST00000459788 TNP1P09430 55 aa3.6□□□□□ -1.83
HDLBP-228ENST00000459788 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
HDLBP-228ENST00000459788 A8MU10 97 aa3.57□□□□□ -1.84
HDLBP-228ENST00000459788 MT1LQ93083 61 aa3.56□□□□□ -1.84
HDLBP-228ENST00000459788 LINC01558Q9Y6Z2 57 aa3.56□□□□□ -1.84
HDLBP-228ENST00000459788 MT1MQ8N339 61 aa3.55□□□□□ -1.84
HDLBP-228ENST00000459788 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
HDLBP-228ENST00000459788 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
HDLBP-228ENST00000459788 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
HDLBP-228ENST00000459788 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
HDLBP-228ENST00000459788 UQCR11O14957 56 aa3.49□□□□□ -1.85
HDLBP-228ENST00000459788 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
HDLBP-228ENST00000459788 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
HDLBP-228ENST00000459788 Q1T7F1 81 aa3.44□□□□□ -1.86
HDLBP-228ENST00000459788 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
HDLBP-228ENST00000459788 KRTAP25-1Q3LHN0 102 aa3.41□□□□□ -1.86
HDLBP-228ENST00000459788 MT4P47944 62 aa3.39□□□□□ -1.87
HDLBP-228ENST00000459788 V9GYY9 64 aa3.39□□□□□ -1.87
HDLBP-228ENST00000459788 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
HDLBP-228ENST00000459788 K7ERS5 55 aa3.37□□□□□ -1.87
HDLBP-228ENST00000459788 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
HDLBP-228ENST00000459788 PSPHP1O15172 72 aa3.36□□□□□ -1.87
HDLBP-228ENST00000459788 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
HDLBP-228ENST00000459788 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
HDLBP-228ENST00000459788 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
HDLBP-228ENST00000459788 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
HDLBP-228ENST00000459788 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
HDLBP-228ENST00000459788 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
HDLBP-228ENST00000459788 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
HDLBP-228ENST00000459788 A6NED7 52 aa3.23□□□□□ -1.89
HDLBP-228ENST00000459788 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
HDLBP-228ENST00000459788 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
HDLBP-228ENST00000459788 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
HDLBP-228ENST00000459788 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
HDLBP-228ENST00000459788 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
HDLBP-228ENST00000459788 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
HDLBP-228ENST00000459788 BRK1Q8WUW1 75 aa3.16□□□□□ -1.9
HDLBP-228ENST00000459788 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
HDLBP-228ENST00000459788 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
HDLBP-228ENST00000459788 H3BS24 57 aa3.12□□□□□ -1.91
HDLBP-228ENST00000459788 ROMO1P60602 79 aa3.1□□□□□ -1.91
HDLBP-228ENST00000459788 MT1AP04731 61 aa3.05□□□□□ -1.92
HDLBP-228ENST00000459788 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
HDLBP-228ENST00000459788 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
HDLBP-228ENST00000459788 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
HDLBP-228ENST00000459788 KTN1-AS1Q86SY8 53 aa2.98□□□□□ -1.93
HDLBP-228ENST00000459788 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
HDLBP-228ENST00000459788 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
HDLBP-228ENST00000459788 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
HDLBP-228ENST00000459788 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
HDLBP-228ENST00000459788 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
HDLBP-228ENST00000459788 PRAC1Q96KF2 57 aa2.85□□□□□ -1.95
HDLBP-228ENST00000459788 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
HDLBP-228ENST00000459788 MT3P25713 68 aa2.8□□□□□ -1.96
HDLBP-228ENST00000459788 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
HDLBP-228ENST00000459788 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.97
HDLBP-228ENST00000459788 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
HDLBP-228ENST00000459788 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
HDLBP-228ENST00000459788 LUZP6Q538Z0 58 aa2.56□□□□□ -2
HDLBP-228ENST00000459788 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
HDLBP-228ENST00000459788 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
HDLBP-228ENST00000459788 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
HDLBP-228ENST00000459788 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
HDLBP-228ENST00000459788 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
HDLBP-228ENST00000459788 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
HDLBP-228ENST00000459788 INE1O15225 51 aa2.08□□□□□ -2.08
HDLBP-228ENST00000459788 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
HDLBP-228ENST00000459788 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
HDLBP-228ENST00000459788 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
HDLBP-228ENST00000459788 PRM1P04553 51 aa1.55□□□□□ -2.16
HDLBP-228ENST00000459788 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
HDLBP-228ENST00000459788 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms