RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
TCF4-204ENST00000457482 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
TCF4-204ENST00000457482 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
TCF4-204ENST00000457482 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
TCF4-204ENST00000457482 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
TCF4-204ENST00000457482 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
TCF4-204ENST00000457482 KMT2DO14686 5537 aa4.44□□□□□ -1.7
TCF4-204ENST00000457482 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.7
TCF4-204ENST00000457482 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
TCF4-204ENST00000457482 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
TCF4-204ENST00000457482 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
TCF4-204ENST00000457482 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
TCF4-204ENST00000457482 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
TCF4-204ENST00000457482 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
TCF4-204ENST00000457482 INE1O15225 51 aa4.25□□□□□ -1.73
TCF4-204ENST00000457482 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
TCF4-204ENST00000457482 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
TCF4-204ENST00000457482 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
TCF4-204ENST00000457482 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
TCF4-204ENST00000457482 MT1EP04732 61 aa4.07□□□□□ -1.76
TCF4-204ENST00000457482 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
TCF4-204ENST00000457482 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
TCF4-204ENST00000457482 MT1LQ93083 61 aa4.03□□□□□ -1.76
TCF4-204ENST00000457482 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
TCF4-204ENST00000457482 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
TCF4-204ENST00000457482 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
TCF4-204ENST00000457482 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
TCF4-204ENST00000457482 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
TCF4-204ENST00000457482 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
TCF4-204ENST00000457482 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
TCF4-204ENST00000457482 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
TCF4-204ENST00000457482 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
TCF4-204ENST00000457482 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
TCF4-204ENST00000457482 MT1MQ8N339 61 aa3.82□□□□□ -1.8
TCF4-204ENST00000457482 MT1GP13640 62 aa3.81□□□□□ -1.8
TCF4-204ENST00000457482 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
TCF4-204ENST00000457482 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
TCF4-204ENST00000457482 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
TCF4-204ENST00000457482 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
TCF4-204ENST00000457482 NEBP20929 6669 aa3.68□□□□□ -1.82
TCF4-204ENST00000457482 MT3P25713 68 aa3.66□□□□□ -1.82
TCF4-204ENST00000457482 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
TCF4-204ENST00000457482 SPRR2EP22531 72 aa3.63□□□□□ -1.83
TCF4-204ENST00000457482 SPRR2BP35325 72 aa3.63□□□□□ -1.83
TCF4-204ENST00000457482 SPRR2AP35326 72 aa3.63□□□□□ -1.83
TCF4-204ENST00000457482 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
TCF4-204ENST00000457482 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
TCF4-204ENST00000457482 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.84
TCF4-204ENST00000457482 SPRR2DP22532 72 aa3.48□□□□□ -1.85
TCF4-204ENST00000457482 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
TCF4-204ENST00000457482 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
TCF4-204ENST00000457482 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
TCF4-204ENST00000457482 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
TCF4-204ENST00000457482 MT1AP04731 61 aa3.37□□□□□ -1.87
TCF4-204ENST00000457482 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
TCF4-204ENST00000457482 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
TCF4-204ENST00000457482 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
TCF4-204ENST00000457482 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.9
TCF4-204ENST00000457482 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
TCF4-204ENST00000457482 KRTAP5-8O75690 187 aa3.09□□□□□ -1.92
TCF4-204ENST00000457482 MT4P47944 62 aa3.08□□□□□ -1.92
TCF4-204ENST00000457482 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
TCF4-204ENST00000457482 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
TCF4-204ENST00000457482 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
TCF4-204ENST00000457482 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
TCF4-204ENST00000457482 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
TCF4-204ENST00000457482 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
TCF4-204ENST00000457482 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
TCF4-204ENST00000457482 PRM1P04553 51 aa2.84□□□□□ -1.95
TCF4-204ENST00000457482 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
TCF4-204ENST00000457482 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
TCF4-204ENST00000457482 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
TCF4-204ENST00000457482 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
TCF4-204ENST00000457482 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
TCF4-204ENST00000457482 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
TCF4-204ENST00000457482 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
TCF4-204ENST00000457482 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 56.6 ms