RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
PKNOX1-204ENST00000456957 MT1EP04732 61 aa5.98□□□□□ -1.45
PKNOX1-204ENST00000456957 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
PKNOX1-204ENST00000456957 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
PKNOX1-204ENST00000456957 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
PKNOX1-204ENST00000456957 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
PKNOX1-204ENST00000456957 SPRR2DP22532 72 aa5.87□□□□□ -1.47
PKNOX1-204ENST00000456957 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
PKNOX1-204ENST00000456957 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
PKNOX1-204ENST00000456957 MT1LQ93083 61 aa5.79□□□□□ -1.48
PKNOX1-204ENST00000456957 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
PKNOX1-204ENST00000456957 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
PKNOX1-204ENST00000456957 MT1GP13640 62 aa5.71□□□□□ -1.5
PKNOX1-204ENST00000456957 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
PKNOX1-204ENST00000456957 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
PKNOX1-204ENST00000456957 MT1MQ8N339 61 aa5.65□□□□□ -1.5
PKNOX1-204ENST00000456957 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
PKNOX1-204ENST00000456957 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
PKNOX1-204ENST00000456957 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
PKNOX1-204ENST00000456957 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
PKNOX1-204ENST00000456957 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
PKNOX1-204ENST00000456957 DSTQ03001 7570 aaKnown RBP5.48□□□□□ -1.53
PKNOX1-204ENST00000456957 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
PKNOX1-204ENST00000456957 GPR98Q8WXG9 6306 aa5.47□□□□□ -1.53
PKNOX1-204ENST00000456957 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
PKNOX1-204ENST00000456957 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
PKNOX1-204ENST00000456957 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
PKNOX1-204ENST00000456957 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
PKNOX1-204ENST00000456957 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
PKNOX1-204ENST00000456957 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
PKNOX1-204ENST00000456957 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
PKNOX1-204ENST00000456957 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
PKNOX1-204ENST00000456957 MT4P47944 62 aa5.14□□□□□ -1.59
PKNOX1-204ENST00000456957 KRTAP5-4Q6L8H1 288 aa5.1□□□□□ -1.59
PKNOX1-204ENST00000456957 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
PKNOX1-204ENST00000456957 AHNAK2Q8IVF2 5795 aa5.03□□□□□ -1.6
PKNOX1-204ENST00000456957 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
PKNOX1-204ENST00000456957 MT1AP04731 61 aa4.93□□□□□ -1.62
PKNOX1-204ENST00000456957 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
PKNOX1-204ENST00000456957 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
PKNOX1-204ENST00000456957 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
PKNOX1-204ENST00000456957 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
PKNOX1-204ENST00000456957 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
PKNOX1-204ENST00000456957 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
PKNOX1-204ENST00000456957 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
PKNOX1-204ENST00000456957 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
PKNOX1-204ENST00000456957 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
PKNOX1-204ENST00000456957 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
PKNOX1-204ENST00000456957 MT3P25713 68 aa4.47□□□□□ -1.69
PKNOX1-204ENST00000456957 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
PKNOX1-204ENST00000456957 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
PKNOX1-204ENST00000456957 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
PKNOX1-204ENST00000456957 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
PKNOX1-204ENST00000456957 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
PKNOX1-204ENST00000456957 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
PKNOX1-204ENST00000456957 MUC5ACP98088 5654 aa4.21□□□□□ -1.73
PKNOX1-204ENST00000456957 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.73
PKNOX1-204ENST00000456957 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
PKNOX1-204ENST00000456957 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
PKNOX1-204ENST00000456957 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
PKNOX1-204ENST00000456957 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
PKNOX1-204ENST00000456957 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
PKNOX1-204ENST00000456957 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
PKNOX1-204ENST00000456957 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
PKNOX1-204ENST00000456957 H3BS24 57 aa3.76□□□□□ -1.81
PKNOX1-204ENST00000456957 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
PKNOX1-204ENST00000456957 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
PKNOX1-204ENST00000456957 INE1O15225 51 aa3.68□□□□□ -1.82
PKNOX1-204ENST00000456957 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
PKNOX1-204ENST00000456957 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
PKNOX1-204ENST00000456957 PRM1P04553 51 aa3.21□□□□□ -1.9
PKNOX1-204ENST00000456957 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
PKNOX1-204ENST00000456957 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
PKNOX1-204ENST00000456957 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
PKNOX1-204ENST00000456957 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
PKNOX1-204ENST00000456957 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
PKNOX1-204ENST00000456957 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
PKNOX1-204ENST00000456957 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 61.7 ms