RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 V9GYY9 64 aa5.31□□□□□ -1.56
LINC01563-201ENST00000456235 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
LINC01563-201ENST00000456235 SPRR2DP22532 72 aa5.27□□□□□ -1.57
LINC01563-201ENST00000456235 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
LINC01563-201ENST00000456235 MT1EP04732 61 aa5.23□□□□□ -1.57
LINC01563-201ENST00000456235 TNP1P09430 55 aa5.23□□□□□ -1.57
LINC01563-201ENST00000456235 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
LINC01563-201ENST00000456235 A6NED7 52 aa5.22□□□□□ -1.57
LINC01563-201ENST00000456235 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
LINC01563-201ENST00000456235 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
LINC01563-201ENST00000456235 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
LINC01563-201ENST00000456235 KRTAP15-1Q3LI76 137 aa5.16□□□□□ -1.58
LINC01563-201ENST00000456235 K7ERS5 55 aa5.13□□□□□ -1.59
LINC01563-201ENST00000456235 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
LINC01563-201ENST00000456235 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
LINC01563-201ENST00000456235 MT1LQ93083 61 aa5.03□□□□□ -1.6
LINC01563-201ENST00000456235 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
LINC01563-201ENST00000456235 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
LINC01563-201ENST00000456235 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
LINC01563-201ENST00000456235 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
LINC01563-201ENST00000456235 MT1MQ8N339 61 aa4.97□□□□□ -1.61
LINC01563-201ENST00000456235 MT1GP13640 62 aa4.96□□□□□ -1.62
LINC01563-201ENST00000456235 CDC42SE1Q9NRR8 79 aa4.96□□□□□ -1.62
LINC01563-201ENST00000456235 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
LINC01563-201ENST00000456235 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
LINC01563-201ENST00000456235 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
LINC01563-201ENST00000456235 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
LINC01563-201ENST00000456235 ROMO1P60602 79 aa4.88□□□□□ -1.63
LINC01563-201ENST00000456235 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
LINC01563-201ENST00000456235 MT4P47944 62 aa4.64□□□□□ -1.67
LINC01563-201ENST00000456235 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
LINC01563-201ENST00000456235 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
LINC01563-201ENST00000456235 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
LINC01563-201ENST00000456235 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
LINC01563-201ENST00000456235 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
LINC01563-201ENST00000456235 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
LINC01563-201ENST00000456235 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
LINC01563-201ENST00000456235 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
LINC01563-201ENST00000456235 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
LINC01563-201ENST00000456235 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
LINC01563-201ENST00000456235 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
LINC01563-201ENST00000456235 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
LINC01563-201ENST00000456235 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
LINC01563-201ENST00000456235 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
LINC01563-201ENST00000456235 MT1AP04731 61 aa4.26□□□□□ -1.73
LINC01563-201ENST00000456235 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
LINC01563-201ENST00000456235 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
LINC01563-201ENST00000456235 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
LINC01563-201ENST00000456235 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
LINC01563-201ENST00000456235 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
LINC01563-201ENST00000456235 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
LINC01563-201ENST00000456235 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
LINC01563-201ENST00000456235 MT3P25713 68 aa3.88□□□□□ -1.79
LINC01563-201ENST00000456235 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
LINC01563-201ENST00000456235 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
LINC01563-201ENST00000456235 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
LINC01563-201ENST00000456235 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
LINC01563-201ENST00000456235 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
LINC01563-201ENST00000456235 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
LINC01563-201ENST00000456235 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
LINC01563-201ENST00000456235 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
LINC01563-201ENST00000456235 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
LINC01563-201ENST00000456235 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
LINC01563-201ENST00000456235 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
LINC01563-201ENST00000456235 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
LINC01563-201ENST00000456235 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
LINC01563-201ENST00000456235 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
LINC01563-201ENST00000456235 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
LINC01563-201ENST00000456235 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
LINC01563-201ENST00000456235 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
LINC01563-201ENST00000456235 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
LINC01563-201ENST00000456235 PRM1P04553 51 aa2.57□□□□□ -2
LINC01563-201ENST00000456235 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
LINC01563-201ENST00000456235 INE1O15225 51 aa2.35□□□□□ -2.03
LINC01563-201ENST00000456235 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
LINC01563-201ENST00000456235 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
LINC01563-201ENST00000456235 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 163.4 ms