RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
SMCR2-201ENST00000456090 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
SMCR2-201ENST00000456090 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
SMCR2-201ENST00000456090 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
SMCR2-201ENST00000456090 A0A1B0GU33 70 aa4.7□□□□□ -1.66
SMCR2-201ENST00000456090 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
SMCR2-201ENST00000456090 A0A0D9SG42 100 aa4.66□□□□□ -1.66
SMCR2-201ENST00000456090 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
SMCR2-201ENST00000456090 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
SMCR2-201ENST00000456090 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
SMCR2-201ENST00000456090 MT1EP04732 61 aa4.62□□□□□ -1.67
SMCR2-201ENST00000456090 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
SMCR2-201ENST00000456090 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
SMCR2-201ENST00000456090 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
SMCR2-201ENST00000456090 SPINT4Q6UDR6 99 aa4.59□□□□□ -1.67
SMCR2-201ENST00000456090 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
SMCR2-201ENST00000456090 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
SMCR2-201ENST00000456090 GPR98Q8WXG9 6306 aa4.51□□□□□ -1.69
SMCR2-201ENST00000456090 K7ERS5 55 aa4.48□□□□□ -1.69
SMCR2-201ENST00000456090 MT1GP13640 62 aa4.47□□□□□ -1.69
SMCR2-201ENST00000456090 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
SMCR2-201ENST00000456090 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
SMCR2-201ENST00000456090 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
SMCR2-201ENST00000456090 MT1MQ8N339 61 aa4.41□□□□□ -1.7
SMCR2-201ENST00000456090 MT1LQ93083 61 aa4.4□□□□□ -1.71
SMCR2-201ENST00000456090 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
SMCR2-201ENST00000456090 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
SMCR2-201ENST00000456090 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
SMCR2-201ENST00000456090 ROMO1P60602 79 aa4.36□□□□□ -1.71
SMCR2-201ENST00000456090 TNP1P09430 55 aa4.35□□□□□ -1.71
SMCR2-201ENST00000456090 MT4P47944 62 aa4.35□□□□□ -1.71
SMCR2-201ENST00000456090 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
SMCR2-201ENST00000456090 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SMCR2-201ENST00000456090 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
SMCR2-201ENST00000456090 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
SMCR2-201ENST00000456090 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
SMCR2-201ENST00000456090 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
SMCR2-201ENST00000456090 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
SMCR2-201ENST00000456090 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
SMCR2-201ENST00000456090 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
SMCR2-201ENST00000456090 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
SMCR2-201ENST00000456090 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
SMCR2-201ENST00000456090 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
SMCR2-201ENST00000456090 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
SMCR2-201ENST00000456090 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
SMCR2-201ENST00000456090 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
SMCR2-201ENST00000456090 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
SMCR2-201ENST00000456090 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SMCR2-201ENST00000456090 MT1AP04731 61 aa3.73□□□□□ -1.81
SMCR2-201ENST00000456090 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
SMCR2-201ENST00000456090 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
SMCR2-201ENST00000456090 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
SMCR2-201ENST00000456090 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
SMCR2-201ENST00000456090 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
SMCR2-201ENST00000456090 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
SMCR2-201ENST00000456090 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
SMCR2-201ENST00000456090 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.85
SMCR2-201ENST00000456090 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
SMCR2-201ENST00000456090 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
SMCR2-201ENST00000456090 MT3P25713 68 aa3.43□□□□□ -1.86
SMCR2-201ENST00000456090 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
SMCR2-201ENST00000456090 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SMCR2-201ENST00000456090 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
SMCR2-201ENST00000456090 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SMCR2-201ENST00000456090 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SMCR2-201ENST00000456090 INE1O15225 51 aa3□□□□□ -1.93
SMCR2-201ENST00000456090 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
SMCR2-201ENST00000456090 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
SMCR2-201ENST00000456090 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
SMCR2-201ENST00000456090 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
SMCR2-201ENST00000456090 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
SMCR2-201ENST00000456090 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SMCR2-201ENST00000456090 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SMCR2-201ENST00000456090 PRM1P04553 51 aa2.29□□□□□ -2.04
SMCR2-201ENST00000456090 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SMCR2-201ENST00000456090 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
SMCR2-201ENST00000456090 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 37.9 ms