RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
RIF1-207ENST00000454583 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
RIF1-207ENST00000454583 SYNE2Q8WXH0 6885 aaKnown RBP2□□□□□ -2.09
RIF1-207ENST00000454583 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
RIF1-207ENST00000454583 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
RIF1-207ENST00000454583 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
RIF1-207ENST00000454583 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
RIF1-207ENST00000454583 K7ERS5 55 aa1.96□□□□□ -2.1
RIF1-207ENST00000454583 A0A0D9SG42 100 aa1.95□□□□□ -2.1
RIF1-207ENST00000454583 R4GN34 69 aa1.94□□□□□ -2.1
RIF1-207ENST00000454583 NEBP20929 6669 aa1.93□□□□□ -2.1
RIF1-207ENST00000454583 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
RIF1-207ENST00000454583 KRTAP8-1Q8IUC2 63 aa1.93□□□□□ -2.1
RIF1-207ENST00000454583 M0R2T5 61 aa1.91□□□□□ -2.1
RIF1-207ENST00000454583 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
RIF1-207ENST00000454583 MT1EP04732 61 aa1.88□□□□□ -2.11
RIF1-207ENST00000454583 SPINT4Q6UDR6 99 aa1.87□□□□□ -2.11
RIF1-207ENST00000454583 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
RIF1-207ENST00000454583 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
RIF1-207ENST00000454583 LCE1EQ5T753 118 aa1.86□□□□□ -2.11
RIF1-207ENST00000454583 CAMK2N1Q7Z7J9 78 aa1.85□□□□□ -2.11
RIF1-207ENST00000454583 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
RIF1-207ENST00000454583 MT1LQ93083 61 aa1.82□□□□□ -2.12
RIF1-207ENST00000454583 KRTAP19-5Q3LI72 72 aa1.81□□□□□ -2.12
RIF1-207ENST00000454583 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
RIF1-207ENST00000454583 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
RIF1-207ENST00000454583 TNP1P09430 55 aa1.79□□□□□ -2.12
RIF1-207ENST00000454583 PRO2289Q9P1D8 64 aa1.77□□□□□ -2.13
RIF1-207ENST00000454583 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
RIF1-207ENST00000454583 KRTAP9-6A8MVA2 160 aa1.77□□□□□ -2.13
RIF1-207ENST00000454583 PLAC4Q8WY50 150 aa1.77□□□□□ -2.13
RIF1-207ENST00000454583 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
RIF1-207ENST00000454583 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
RIF1-207ENST00000454583 MT1MQ8N339 61 aa1.75□□□□□ -2.13
RIF1-207ENST00000454583 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
RIF1-207ENST00000454583 LCE3CQ5T5A8 94 aa1.71□□□□□ -2.14
RIF1-207ENST00000454583 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
RIF1-207ENST00000454583 MT1GP13640 62 aa1.7□□□□□ -2.14
RIF1-207ENST00000454583 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
RIF1-207ENST00000454583 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
RIF1-207ENST00000454583 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
RIF1-207ENST00000454583 KRTAP4-3Q9BYR4 195 aa1.68□□□□□ -2.14
RIF1-207ENST00000454583 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
RIF1-207ENST00000454583 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
RIF1-207ENST00000454583 SPRR2EP22531 72 aa1.61□□□□□ -2.15
RIF1-207ENST00000454583 SPRR2BP35325 72 aa1.61□□□□□ -2.15
RIF1-207ENST00000454583 SPRR2AP35326 72 aa1.61□□□□□ -2.15
RIF1-207ENST00000454583 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
RIF1-207ENST00000454583 KRTAP20-1Q3LI63 56 aa1.58□□□□□ -2.16
RIF1-207ENST00000454583 SPRR2DP22532 72 aa1.55□□□□□ -2.16
RIF1-207ENST00000454583 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
RIF1-207ENST00000454583 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
RIF1-207ENST00000454583 MT1AP04731 61 aa1.52□□□□□ -2.17
RIF1-207ENST00000454583 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
RIF1-207ENST00000454583 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
RIF1-207ENST00000454583 LCE3EQ5T5B0 92 aa1.48□□□□□ -2.17
RIF1-207ENST00000454583 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
RIF1-207ENST00000454583 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
RIF1-207ENST00000454583 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
RIF1-207ENST00000454583 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
RIF1-207ENST00000454583 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
RIF1-207ENST00000454583 INE1O15225 51 aa1.41□□□□□ -2.18
RIF1-207ENST00000454583 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
RIF1-207ENST00000454583 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
RIF1-207ENST00000454583 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
RIF1-207ENST00000454583 LCE3DQ9BYE3 92 aa1.37□□□□□ -2.19
RIF1-207ENST00000454583 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
RIF1-207ENST00000454583 KRTAP5-8O75690 187 aa1.34□□□□□ -2.19
RIF1-207ENST00000454583 MT4P47944 62 aa1.3□□□□□ -2.2
RIF1-207ENST00000454583 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
RIF1-207ENST00000454583 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
RIF1-207ENST00000454583 LCE1CQ5T751 118 aa1.24□□□□□ -2.21
RIF1-207ENST00000454583 LCE1BQ5T7P3 118 aa1.24□□□□□ -2.21
RIF1-207ENST00000454583 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
RIF1-207ENST00000454583 PRM1P04553 51 aa1.07□□□□□ -2.24
RIF1-207ENST00000454583 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
RIF1-207ENST00000454583 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.28
RIF1-207ENST00000454583 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 14.2 ms