RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 KRTAP10-12P60413 245 aa2.36□□□□□ -2.03
HLA-DPA3-207ENST00000454398 KRTAP25-1Q3LHN0 102 aa2.36□□□□□ -2.03
HLA-DPA3-207ENST00000454398 K7ERS5 55 aa2.34□□□□□ -2.03
HLA-DPA3-207ENST00000454398 A0A1B0GU33 70 aa2.33□□□□□ -2.04
HLA-DPA3-207ENST00000454398 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
HLA-DPA3-207ENST00000454398 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
HLA-DPA3-207ENST00000454398 ROMO1P60602 79 aa2.3□□□□□ -2.04
HLA-DPA3-207ENST00000454398 CAMK2N1Q7Z7J9 78 aa2.3□□□□□ -2.04
HLA-DPA3-207ENST00000454398 LCE1DQ5T752 114 aa2.29□□□□□ -2.04
HLA-DPA3-207ENST00000454398 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
HLA-DPA3-207ENST00000454398 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
HLA-DPA3-207ENST00000454398 LCE5AQ5TCM9 118 aa2.28□□□□□ -2.04
HLA-DPA3-207ENST00000454398 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
HLA-DPA3-207ENST00000454398 MT1EP04732 61 aa2.26□□□□□ -2.05
HLA-DPA3-207ENST00000454398 MT4P47944 62 aa2.26□□□□□ -2.05
HLA-DPA3-207ENST00000454398 A0A0D9SG42 100 aa2.25□□□□□ -2.05
HLA-DPA3-207ENST00000454398 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
HLA-DPA3-207ENST00000454398 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
HLA-DPA3-207ENST00000454398 KRTAP19-3Q7Z4W3 81 aa2.24□□□□□ -2.05
HLA-DPA3-207ENST00000454398 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
HLA-DPA3-207ENST00000454398 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
HLA-DPA3-207ENST00000454398 C10orf95Q9H7T3 257 aa2.21□□□□□ -2.06
HLA-DPA3-207ENST00000454398 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
HLA-DPA3-207ENST00000454398 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
HLA-DPA3-207ENST00000454398 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
HLA-DPA3-207ENST00000454398 MT1MQ8N339 61 aa2.16□□□□□ -2.06
HLA-DPA3-207ENST00000454398 KRTAP15-1Q3LI76 137 aa2.15□□□□□ -2.07
HLA-DPA3-207ENST00000454398 LCE4AQ5TA78 99 aa2.15□□□□□ -2.07
HLA-DPA3-207ENST00000454398 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
HLA-DPA3-207ENST00000454398 KRTAP5-3Q6L8H2 238 aa2.14□□□□□ -2.07
HLA-DPA3-207ENST00000454398 MT1LQ93083 61 aa2.13□□□□□ -2.07
HLA-DPA3-207ENST00000454398 MT1GP13640 62 aa2.12□□□□□ -2.07
HLA-DPA3-207ENST00000454398 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
HLA-DPA3-207ENST00000454398 KRTAP9-9Q9BYP9 154 aa2.11□□□□□ -2.07
HLA-DPA3-207ENST00000454398 KRTAP9-4Q9BYQ2 154 aa2.11□□□□□ -2.07
HLA-DPA3-207ENST00000454398 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
HLA-DPA3-207ENST00000454398 KRTAP4-7Q9BYR0 210 aa2.1□□□□□ -2.07
HLA-DPA3-207ENST00000454398 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
HLA-DPA3-207ENST00000454398 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
HLA-DPA3-207ENST00000454398 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
HLA-DPA3-207ENST00000454398 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
HLA-DPA3-207ENST00000454398 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
HLA-DPA3-207ENST00000454398 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
HLA-DPA3-207ENST00000454398 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
HLA-DPA3-207ENST00000454398 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
HLA-DPA3-207ENST00000454398 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
HLA-DPA3-207ENST00000454398 TNP1P09430 55 aa1.93□□□□□ -2.1
HLA-DPA3-207ENST00000454398 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
HLA-DPA3-207ENST00000454398 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
HLA-DPA3-207ENST00000454398 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
HLA-DPA3-207ENST00000454398 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
HLA-DPA3-207ENST00000454398 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
HLA-DPA3-207ENST00000454398 INE1O15225 51 aa1.83□□□□□ -2.12
HLA-DPA3-207ENST00000454398 KRTAP19-4Q3LI73 84 aa1.83□□□□□ -2.12
HLA-DPA3-207ENST00000454398 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
HLA-DPA3-207ENST00000454398 MT1AP04731 61 aa1.79□□□□□ -2.12
HLA-DPA3-207ENST00000454398 KRTAP6-2Q3LI66 62 aa1.78□□□□□ -2.12
HLA-DPA3-207ENST00000454398 OBSCNQ5VST9 7968 aa1.78□□□□□ -2.12
HLA-DPA3-207ENST00000454398 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
HLA-DPA3-207ENST00000454398 LCE3CQ5T5A8 94 aa1.75□□□□□ -2.13
HLA-DPA3-207ENST00000454398 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
HLA-DPA3-207ENST00000454398 MT3P25713 68 aa1.61□□□□□ -2.15
HLA-DPA3-207ENST00000454398 LCE1BQ5T7P3 118 aa1.52□□□□□ -2.17
HLA-DPA3-207ENST00000454398 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
HLA-DPA3-207ENST00000454398 LCE1EQ5T753 118 aa1.48□□□□□ -2.17
HLA-DPA3-207ENST00000454398 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
HLA-DPA3-207ENST00000454398 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
HLA-DPA3-207ENST00000454398 LCE1FQ5T754 118 aa1.36□□□□□ -2.19
HLA-DPA3-207ENST00000454398 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
HLA-DPA3-207ENST00000454398 PRM1P04553 51 aa1.24□□□□□ -2.21
HLA-DPA3-207ENST00000454398 KRTAP4-4Q9BYR3 166 aa1.22□□□□□ -2.21
HLA-DPA3-207ENST00000454398 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
HLA-DPA3-207ENST00000454398 LCE3EQ5T5B0 92 aa1.21□□□□□ -2.22
HLA-DPA3-207ENST00000454398 LCE3DQ9BYE3 92 aa1.21□□□□□ -2.22
HLA-DPA3-207ENST00000454398 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
HLA-DPA3-207ENST00000454398 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
HLA-DPA3-207ENST00000454398 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 108.1 ms