RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.29
NCL-205ENST00000453992 KRTAP2-2Q9BYT5 123 aa7.01□□□□□ -1.29
NCL-205ENST00000453992 KRTAP2-1Q9BYU5 128 aa7.01□□□□□ -1.29
NCL-205ENST00000453992 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
NCL-205ENST00000453992 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
NCL-205ENST00000453992 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
NCL-205ENST00000453992 LCE3BQ5TA77 95 aa6.92□□□□□ -1.3
NCL-205ENST00000453992 MT1LQ93083 61 aa6.91□□□□□ -1.3
NCL-205ENST00000453992 MT1GP13640 62 aa6.9□□□□□ -1.3
NCL-205ENST00000453992 BRK1Q8WUW1 75 aa6.9□□□□□ -1.3
NCL-205ENST00000453992 GPR98Q8WXG9 6306 aa6.87□□□□□ -1.31
NCL-205ENST00000453992 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
NCL-205ENST00000453992 MT1MQ8N339 61 aa6.78□□□□□ -1.32
NCL-205ENST00000453992 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
NCL-205ENST00000453992 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
NCL-205ENST00000453992 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
NCL-205ENST00000453992 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
NCL-205ENST00000453992 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
NCL-205ENST00000453992 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
NCL-205ENST00000453992 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
NCL-205ENST00000453992 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
NCL-205ENST00000453992 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
NCL-205ENST00000453992 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
NCL-205ENST00000453992 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
NCL-205ENST00000453992 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
NCL-205ENST00000453992 AHNAK2Q8IVF2 5795 aa6.26□□□□□ -1.41
NCL-205ENST00000453992 MT4P47944 62 aa6.24□□□□□ -1.41
NCL-205ENST00000453992 KRTAP5-4Q6L8H1 288 aa6.24□□□□□ -1.41
NCL-205ENST00000453992 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
NCL-205ENST00000453992 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
NCL-205ENST00000453992 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
NCL-205ENST00000453992 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
NCL-205ENST00000453992 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
NCL-205ENST00000453992 KRTAP5-10Q6L8G5 202 aa6.04□□□□□ -1.44
NCL-205ENST00000453992 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
NCL-205ENST00000453992 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
NCL-205ENST00000453992 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
NCL-205ENST00000453992 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
NCL-205ENST00000453992 MT1AP04731 61 aa5.89□□□□□ -1.47
NCL-205ENST00000453992 KRTAP5-7Q6L8G8 165 aa5.87□□□□□ -1.47
NCL-205ENST00000453992 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
NCL-205ENST00000453992 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
NCL-205ENST00000453992 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
NCL-205ENST00000453992 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
NCL-205ENST00000453992 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
NCL-205ENST00000453992 KRTAP5-2Q701N4 177 aa5.55□□□□□ -1.52
NCL-205ENST00000453992 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
NCL-205ENST00000453992 MT3P25713 68 aa5.37□□□□□ -1.55
NCL-205ENST00000453992 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
NCL-205ENST00000453992 AHNAKQ09666 5890 aaKnown RBP5.31□□□□□ -1.56
NCL-205ENST00000453992 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
NCL-205ENST00000453992 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
NCL-205ENST00000453992 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
NCL-205ENST00000453992 KRTAP5-8O75690 187 aa5.16□□□□□ -1.58
NCL-205ENST00000453992 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
NCL-205ENST00000453992 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
NCL-205ENST00000453992 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
NCL-205ENST00000453992 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
NCL-205ENST00000453992 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
NCL-205ENST00000453992 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
NCL-205ENST00000453992 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
NCL-205ENST00000453992 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
NCL-205ENST00000453992 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
NCL-205ENST00000453992 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
NCL-205ENST00000453992 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
NCL-205ENST00000453992 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
NCL-205ENST00000453992 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
NCL-205ENST00000453992 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
NCL-205ENST00000453992 INE1O15225 51 aa3.89□□□□□ -1.79
NCL-205ENST00000453992 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
NCL-205ENST00000453992 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
NCL-205ENST00000453992 H3BS24 57 aa3.6□□□□□ -1.83
NCL-205ENST00000453992 PRM1P04553 51 aa3.6□□□□□ -1.83
NCL-205ENST00000453992 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
NCL-205ENST00000453992 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
NCL-205ENST00000453992 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
NCL-205ENST00000453992 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
NCL-205ENST00000453992 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms