RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TRAV22A0A0B4J277 110 aa1.6□□□□□ -2.15
LINC00393-202ENST00000452852 LOC101927531A0A1B0GV80 90 aa1.6□□□□□ -2.15
LINC00393-202ENST00000452852 INE1O15225 51 aa1.6□□□□□ -2.15
LINC00393-202ENST00000452852 NDUFC1O43677 76 aa1.6□□□□□ -2.15
LINC00393-202ENST00000452852 COL5A1-AS1Q5SY13 56 aa1.6□□□□□ -2.15
LINC00393-202ENST00000452852 CYP4F30PQ9H0H9 118 aa1.6□□□□□ -2.15
LINC00393-202ENST00000452852 GTF2H5Q6ZYL4 71 aa1.59□□□□□ -2.15
LINC00393-202ENST00000452852 K7EP34 96 aa1.58□□□□□ -2.16
LINC00393-202ENST00000452852 ATOX1O00244 68 aa1.58□□□□□ -2.16
LINC00393-202ENST00000452852 ACYP1P07311 99 aa1.58□□□□□ -2.16
LINC00393-202ENST00000452852 H0Y9P7 68 aa1.57□□□□□ -2.16
LINC00393-202ENST00000452852 K7ERU9 68 aa1.57□□□□□ -2.16
LINC00393-202ENST00000452852 PLAC4Q8WY50 150 aa1.57□□□□□ -2.16
LINC00393-202ENST00000452852 A0A087WVE0 104 aa1.56□□□□□ -2.16
LINC00393-202ENST00000452852 H0YAA0 97 aa1.56□□□□□ -2.16
LINC00393-202ENST00000452852 J3QR89 54 aa1.56□□□□□ -2.16
LINC00393-202ENST00000452852 ETDBQ3ZM63 59 aa1.56□□□□□ -2.16
LINC00393-202ENST00000452852 ATP5EP2Q5VTU8 51 aa1.56□□□□□ -2.16
LINC00393-202ENST00000452852 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
LINC00393-202ENST00000452852 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
LINC00393-202ENST00000452852 SPRR2EP22531 72 aa1.55□□□□□ -2.16
LINC00393-202ENST00000452852 SPRR2BP35325 72 aa1.55□□□□□ -2.16
LINC00393-202ENST00000452852 SPRR2AP35326 72 aa1.55□□□□□ -2.16
LINC00393-202ENST00000452852 C20orf197Q8N268 126 aa1.55□□□□□ -2.16
LINC00393-202ENST00000452852 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
LINC00393-202ENST00000452852 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
LINC00393-202ENST00000452852 LINC00208Q96KT6 92 aa1.53□□□□□ -2.16
LINC00393-202ENST00000452852 KMT2DO14686 5537 aa1.52□□□□□ -2.17
LINC00393-202ENST00000452852 M0QZ58 72 aa1.52□□□□□ -2.17
LINC00393-202ENST00000452852 MT1XP80297 61 aa1.51□□□□□ -2.17
LINC00393-202ENST00000452852 LINC00643Q86TS7 51 aa1.51□□□□□ -2.17
LINC00393-202ENST00000452852 MDN1Q9NU22 5596 aa1.51□□□□□ -2.17
LINC00393-202ENST00000452852 SPRR2DP22532 72 aa1.5□□□□□ -2.17
LINC00393-202ENST00000452852 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
LINC00393-202ENST00000452852 MT-ATP8P03928 68 aa1.49□□□□□ -2.17
LINC00393-202ENST00000452852 SPTSSBQ8NFR3 76 aa1.48□□□□□ -2.17
LINC00393-202ENST00000452852 DMAC1Q96GE9 116 aa1.48□□□□□ -2.17
LINC00393-202ENST00000452852 CHKB-CPT1BH3BT56 60 aa1.46□□□□□ -2.18
LINC00393-202ENST00000452852 ACYP2P14621 99 aa1.46□□□□□ -2.18
LINC00393-202ENST00000452852 A0A1B0GV90 55 aa1.43□□□□□ -2.18
LINC00393-202ENST00000452852 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
LINC00393-202ENST00000452852 SERP1Q9Y6X1 66 aa1.38□□□□□ -2.19
LINC00393-202ENST00000452852 A0A0D9SG42 100 aa1.36□□□□□ -2.19
LINC00393-202ENST00000452852 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
LINC00393-202ENST00000452852 GPR98Q8WXG9 6306 aa1.35□□□□□ -2.19
LINC00393-202ENST00000452852 MT1EP04732 61 aa1.35□□□□□ -2.19
LINC00393-202ENST00000452852 KRTAP19-7Q3SYF9 63 aa1.34□□□□□ -2.19
LINC00393-202ENST00000452852 CCDC179H3BU77 68 aa1.33□□□□□ -2.2
LINC00393-202ENST00000452852 MT1GP13640 62 aa1.33□□□□□ -2.2
LINC00393-202ENST00000452852 SERP2Q8N6R1 65 aa1.33□□□□□ -2.2
LINC00393-202ENST00000452852 SPATA8Q6RVD6 105 aa1.32□□□□□ -2.2
LINC00393-202ENST00000452852 MT4P47944 62 aa1.31□□□□□ -2.2
LINC00393-202ENST00000452852 KRTAP19-5Q3LI72 72 aa1.31□□□□□ -2.2
LINC00393-202ENST00000452852 A0A1B0GU69 56 aa1.3□□□□□ -2.2
LINC00393-202ENST00000452852 TNP1P09430 55 aa1.29□□□□□ -2.2
LINC00393-202ENST00000452852 MT1MQ8N339 61 aa1.29□□□□□ -2.2
LINC00393-202ENST00000452852 MT1LQ93083 61 aa1.28□□□□□ -2.2
LINC00393-202ENST00000452852 PRR15LQ9BU68 103 aa1.27□□□□□ -2.21
LINC00393-202ENST00000452852 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
LINC00393-202ENST00000452852 H7BZZ5 65 aa1.25□□□□□ -2.21
LINC00393-202ENST00000452852 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
LINC00393-202ENST00000452852 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
LINC00393-202ENST00000452852 ATP5EP56381 51 aaPredicted RBP1.21□□□□□ -2.22
LINC00393-202ENST00000452852 UQCR11O14957 56 aa1.19□□□□□ -2.22
LINC00393-202ENST00000452852 KRTAP20-2Q3LI61 65 aa1.19□□□□□ -2.22
LINC00393-202ENST00000452852 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
LINC00393-202ENST00000452852 SYNE1Q8NF91 8797 aaKnown RBP1.15□□□□□ -2.23
LINC00393-202ENST00000452852 MT1AP04731 61 aa1.09□□□□□ -2.23
LINC00393-202ENST00000452852 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
LINC00393-202ENST00000452852 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
LINC00393-202ENST00000452852 MUC5ACP98088 5654 aa1.01□□□□□ -2.25
LINC00393-202ENST00000452852 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
LINC00393-202ENST00000452852 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.25
LINC00393-202ENST00000452852 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
LINC00393-202ENST00000452852 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
LINC00393-202ENST00000452852 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
LINC00393-202ENST00000452852 PRM1P04553 51 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms