RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
TRAPPC12-211ENST00000452495 NEBP20929 6669 aa5.55□□□□□ -1.52
TRAPPC12-211ENST00000452495 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
TRAPPC12-211ENST00000452495 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
TRAPPC12-211ENST00000452495 SPRR2EP22531 72 aa5.47□□□□□ -1.53
TRAPPC12-211ENST00000452495 SPRR2BP35325 72 aa5.47□□□□□ -1.53
TRAPPC12-211ENST00000452495 SPRR2AP35326 72 aa5.47□□□□□ -1.53
TRAPPC12-211ENST00000452495 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
TRAPPC12-211ENST00000452495 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
TRAPPC12-211ENST00000452495 LCE1AQ5T7P2 110 aa5.44□□□□□ -1.54
TRAPPC12-211ENST00000452495 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
TRAPPC12-211ENST00000452495 MT1EP04732 61 aa5.4□□□□□ -1.54
TRAPPC12-211ENST00000452495 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
TRAPPC12-211ENST00000452495 ROMO1P60602 79 aa5.39□□□□□ -1.55
TRAPPC12-211ENST00000452495 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
TRAPPC12-211ENST00000452495 SPRR2DP22532 72 aa5.29□□□□□ -1.56
TRAPPC12-211ENST00000452495 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
TRAPPC12-211ENST00000452495 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
TRAPPC12-211ENST00000452495 KRTAP20-1Q3LI63 56 aa5.26□□□□□ -1.57
TRAPPC12-211ENST00000452495 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
TRAPPC12-211ENST00000452495 MT1LQ93083 61 aa5.22□□□□□ -1.57
TRAPPC12-211ENST00000452495 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
TRAPPC12-211ENST00000452495 MT1GP13640 62 aa5.2□□□□□ -1.58
TRAPPC12-211ENST00000452495 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
TRAPPC12-211ENST00000452495 MT1MQ8N339 61 aa5.12□□□□□ -1.59
TRAPPC12-211ENST00000452495 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
TRAPPC12-211ENST00000452495 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
TRAPPC12-211ENST00000452495 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
TRAPPC12-211ENST00000452495 PRO0628Q9UI54 55 aa5□□□□□ -1.61
TRAPPC12-211ENST00000452495 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
TRAPPC12-211ENST00000452495 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
TRAPPC12-211ENST00000452495 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
TRAPPC12-211ENST00000452495 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
TRAPPC12-211ENST00000452495 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC12-211ENST00000452495 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
TRAPPC12-211ENST00000452495 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
TRAPPC12-211ENST00000452495 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
TRAPPC12-211ENST00000452495 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC12-211ENST00000452495 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
TRAPPC12-211ENST00000452495 MT4P47944 62 aa4.57□□□□□ -1.68
TRAPPC12-211ENST00000452495 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
TRAPPC12-211ENST00000452495 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
TRAPPC12-211ENST00000452495 MT1AP04731 61 aa4.46□□□□□ -1.7
TRAPPC12-211ENST00000452495 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
TRAPPC12-211ENST00000452495 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
TRAPPC12-211ENST00000452495 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
TRAPPC12-211ENST00000452495 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
TRAPPC12-211ENST00000452495 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
TRAPPC12-211ENST00000452495 MT3P25713 68 aa4.34□□□□□ -1.71
TRAPPC12-211ENST00000452495 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
TRAPPC12-211ENST00000452495 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
TRAPPC12-211ENST00000452495 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
TRAPPC12-211ENST00000452495 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
TRAPPC12-211ENST00000452495 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
TRAPPC12-211ENST00000452495 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
TRAPPC12-211ENST00000452495 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
TRAPPC12-211ENST00000452495 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
TRAPPC12-211ENST00000452495 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
TRAPPC12-211ENST00000452495 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
TRAPPC12-211ENST00000452495 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
TRAPPC12-211ENST00000452495 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
TRAPPC12-211ENST00000452495 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
TRAPPC12-211ENST00000452495 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
TRAPPC12-211ENST00000452495 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
TRAPPC12-211ENST00000452495 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
TRAPPC12-211ENST00000452495 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
TRAPPC12-211ENST00000452495 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
TRAPPC12-211ENST00000452495 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
TRAPPC12-211ENST00000452495 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
TRAPPC12-211ENST00000452495 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC12-211ENST00000452495 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
TRAPPC12-211ENST00000452495 INE1O15225 51 aa2.94□□□□□ -1.94
TRAPPC12-211ENST00000452495 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
TRAPPC12-211ENST00000452495 PRM1P04553 51 aa2.77□□□□□ -1.97
TRAPPC12-211ENST00000452495 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
TRAPPC12-211ENST00000452495 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
TRAPPC12-211ENST00000452495 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
TRAPPC12-211ENST00000452495 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms