RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 MDN1Q9NU22 5596 aa4.57□□□□□ -1.68
LINC00339-205ENST00000452322 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
LINC00339-205ENST00000452322 NEBP20929 6669 aa4.54□□□□□ -1.68
LINC00339-205ENST00000452322 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
LINC00339-205ENST00000452322 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
LINC00339-205ENST00000452322 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
LINC00339-205ENST00000452322 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
LINC00339-205ENST00000452322 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
LINC00339-205ENST00000452322 ROMO1P60602 79 aa4.44□□□□□ -1.7
LINC00339-205ENST00000452322 SPRR2EP22531 72 aa4.42□□□□□ -1.7
LINC00339-205ENST00000452322 SPRR2BP35325 72 aa4.42□□□□□ -1.7
LINC00339-205ENST00000452322 SPRR2AP35326 72 aa4.42□□□□□ -1.7
LINC00339-205ENST00000452322 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
LINC00339-205ENST00000452322 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
LINC00339-205ENST00000452322 MT1EP04732 61 aa4.4□□□□□ -1.71
LINC00339-205ENST00000452322 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
LINC00339-205ENST00000452322 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
LINC00339-205ENST00000452322 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
LINC00339-205ENST00000452322 SPRR2DP22532 72 aa4.27□□□□□ -1.73
LINC00339-205ENST00000452322 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
LINC00339-205ENST00000452322 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
LINC00339-205ENST00000452322 MT1LQ93083 61 aa4.25□□□□□ -1.73
LINC00339-205ENST00000452322 MT1GP13640 62 aa4.24□□□□□ -1.73
LINC00339-205ENST00000452322 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
LINC00339-205ENST00000452322 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
LINC00339-205ENST00000452322 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
LINC00339-205ENST00000452322 MT1MQ8N339 61 aa4.16□□□□□ -1.74
LINC00339-205ENST00000452322 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
LINC00339-205ENST00000452322 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
LINC00339-205ENST00000452322 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
LINC00339-205ENST00000452322 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
LINC00339-205ENST00000452322 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
LINC00339-205ENST00000452322 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
LINC00339-205ENST00000452322 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
LINC00339-205ENST00000452322 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
LINC00339-205ENST00000452322 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
LINC00339-205ENST00000452322 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
LINC00339-205ENST00000452322 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
LINC00339-205ENST00000452322 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
LINC00339-205ENST00000452322 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
LINC00339-205ENST00000452322 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
LINC00339-205ENST00000452322 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
LINC00339-205ENST00000452322 MT4P47944 62 aa3.7□□□□□ -1.82
LINC00339-205ENST00000452322 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
LINC00339-205ENST00000452322 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
LINC00339-205ENST00000452322 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
LINC00339-205ENST00000452322 MT1AP04731 61 aa3.63□□□□□ -1.83
LINC00339-205ENST00000452322 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
LINC00339-205ENST00000452322 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
LINC00339-205ENST00000452322 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
LINC00339-205ENST00000452322 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
LINC00339-205ENST00000452322 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
LINC00339-205ENST00000452322 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
LINC00339-205ENST00000452322 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
LINC00339-205ENST00000452322 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
LINC00339-205ENST00000452322 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
LINC00339-205ENST00000452322 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
LINC00339-205ENST00000452322 MT3P25713 68 aa3.3□□□□□ -1.88
LINC00339-205ENST00000452322 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
LINC00339-205ENST00000452322 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
LINC00339-205ENST00000452322 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
LINC00339-205ENST00000452322 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
LINC00339-205ENST00000452322 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
LINC00339-205ENST00000452322 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
LINC00339-205ENST00000452322 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
LINC00339-205ENST00000452322 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
LINC00339-205ENST00000452322 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
LINC00339-205ENST00000452322 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
LINC00339-205ENST00000452322 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
LINC00339-205ENST00000452322 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
LINC00339-205ENST00000452322 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
LINC00339-205ENST00000452322 INE1O15225 51 aa2.49□□□□□ -2.01
LINC00339-205ENST00000452322 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
LINC00339-205ENST00000452322 PRM1P04553 51 aa2.28□□□□□ -2.04
LINC00339-205ENST00000452322 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
LINC00339-205ENST00000452322 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
LINC00339-205ENST00000452322 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
LINC00339-205ENST00000452322 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms