RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
RFX3-207ENST00000449190 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
RFX3-207ENST00000449190 NEBP20929 6669 aa3.71□□□□□ -1.82
RFX3-207ENST00000449190 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
RFX3-207ENST00000449190 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
RFX3-207ENST00000449190 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
RFX3-207ENST00000449190 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
RFX3-207ENST00000449190 TNP1P09430 55 aa3.61□□□□□ -1.83
RFX3-207ENST00000449190 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
RFX3-207ENST00000449190 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
RFX3-207ENST00000449190 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
RFX3-207ENST00000449190 SPRR2EP22531 72 aa3.58□□□□□ -1.84
RFX3-207ENST00000449190 SPRR2BP35325 72 aa3.58□□□□□ -1.84
RFX3-207ENST00000449190 SPRR2AP35326 72 aa3.58□□□□□ -1.84
RFX3-207ENST00000449190 KMT2DO14686 5537 aa3.57□□□□□ -1.84
RFX3-207ENST00000449190 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
RFX3-207ENST00000449190 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
RFX3-207ENST00000449190 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
RFX3-207ENST00000449190 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
RFX3-207ENST00000449190 ROMO1P60602 79 aa3.5□□□□□ -1.85
RFX3-207ENST00000449190 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
RFX3-207ENST00000449190 SPRR2DP22532 72 aa3.46□□□□□ -1.86
RFX3-207ENST00000449190 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
RFX3-207ENST00000449190 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
RFX3-207ENST00000449190 KRTAP19-5Q3LI72 72 aa3.4□□□□□ -1.87
RFX3-207ENST00000449190 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
RFX3-207ENST00000449190 MT1EP04732 61 aa3.37□□□□□ -1.87
RFX3-207ENST00000449190 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
RFX3-207ENST00000449190 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
RFX3-207ENST00000449190 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
RFX3-207ENST00000449190 PMAIP1Q13794 54 aa3.34□□□□□ -1.87
RFX3-207ENST00000449190 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
RFX3-207ENST00000449190 PRO0628Q9UI54 55 aa3.29□□□□□ -1.88
RFX3-207ENST00000449190 MT1GP13640 62 aa3.28□□□□□ -1.88
RFX3-207ENST00000449190 SVIPQ8NHG7 77 aa3.27□□□□□ -1.89
RFX3-207ENST00000449190 MT1LQ93083 61 aa3.26□□□□□ -1.89
RFX3-207ENST00000449190 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
RFX3-207ENST00000449190 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
RFX3-207ENST00000449190 MT3P25713 68 aa3.21□□□□□ -1.9
RFX3-207ENST00000449190 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
RFX3-207ENST00000449190 MT1MQ8N339 61 aa3.19□□□□□ -1.9
RFX3-207ENST00000449190 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
RFX3-207ENST00000449190 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
RFX3-207ENST00000449190 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
RFX3-207ENST00000449190 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
RFX3-207ENST00000449190 MT4P47944 62 aa3□□□□□ -1.93
RFX3-207ENST00000449190 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
RFX3-207ENST00000449190 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
RFX3-207ENST00000449190 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
RFX3-207ENST00000449190 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
RFX3-207ENST00000449190 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
RFX3-207ENST00000449190 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
RFX3-207ENST00000449190 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
RFX3-207ENST00000449190 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
RFX3-207ENST00000449190 MT1AP04731 61 aa2.79□□□□□ -1.96
RFX3-207ENST00000449190 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
RFX3-207ENST00000449190 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
RFX3-207ENST00000449190 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
RFX3-207ENST00000449190 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
RFX3-207ENST00000449190 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
RFX3-207ENST00000449190 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
RFX3-207ENST00000449190 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
RFX3-207ENST00000449190 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
RFX3-207ENST00000449190 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
RFX3-207ENST00000449190 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
RFX3-207ENST00000449190 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
RFX3-207ENST00000449190 NDUFAF8A1L188 74 aa2.35□□□□□ -2.03
RFX3-207ENST00000449190 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
RFX3-207ENST00000449190 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
RFX3-207ENST00000449190 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
RFX3-207ENST00000449190 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
RFX3-207ENST00000449190 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
RFX3-207ENST00000449190 INE1O15225 51 aa1.96□□□□□ -2.1
RFX3-207ENST00000449190 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
RFX3-207ENST00000449190 PRM1P04553 51 aa1.78□□□□□ -2.12
RFX3-207ENST00000449190 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
RFX3-207ENST00000449190 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
RFX3-207ENST00000449190 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms