RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 LCE3AQ5TA76 89 aa1.72□□□□□ -2.13
LMBR1-212ENST00000448926 KRTAP10-7P60409 375 aaPredicted RBP1.7□□□□□ -2.14
LMBR1-212ENST00000448926 MT1XP80297 61 aa1.7□□□□□ -2.14
LMBR1-212ENST00000448926 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
LMBR1-212ENST00000448926 SSPOA2VEC9 5147 aa1.7□□□□□ -2.14
LMBR1-212ENST00000448926 KRTAP10-5P60370 271 aa1.7□□□□□ -2.14
LMBR1-212ENST00000448926 KRTAP19-8Q3LI54 63 aa1.67□□□□□ -2.14
LMBR1-212ENST00000448926 KRTAP10-12P60413 245 aa1.64□□□□□ -2.15
LMBR1-212ENST00000448926 PP632Q6XCG6 107 aa1.63□□□□□ -2.15
LMBR1-212ENST00000448926 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
LMBR1-212ENST00000448926 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
LMBR1-212ENST00000448926 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
LMBR1-212ENST00000448926 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
LMBR1-212ENST00000448926 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
LMBR1-212ENST00000448926 PRO2289Q9P1D8 64 aa1.58□□□□□ -2.16
LMBR1-212ENST00000448926 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
LMBR1-212ENST00000448926 KRTAP8-1Q8IUC2 63 aa1.57□□□□□ -2.16
LMBR1-212ENST00000448926 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
LMBR1-212ENST00000448926 SYNE2Q8WXH0 6885 aaKnown RBP1.54□□□□□ -2.16
LMBR1-212ENST00000448926 MACF1Q9UPN3 7388 aaKnown RBP1.52□□□□□ -2.17
LMBR1-212ENST00000448926 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
LMBR1-212ENST00000448926 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
LMBR1-212ENST00000448926 KRTAP19-7Q3SYF9 63 aa1.52□□□□□ -2.17
LMBR1-212ENST00000448926 SPRR5A0A1B0GTR4 108 aa1.51□□□□□ -2.17
LMBR1-212ENST00000448926 KRTAP4-3Q9BYR4 195 aa1.51□□□□□ -2.17
LMBR1-212ENST00000448926 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
LMBR1-212ENST00000448926 CRCT1Q9UGL9 99 aa1.5□□□□□ -2.17
LMBR1-212ENST00000448926 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
LMBR1-212ENST00000448926 LCE3CQ5T5A8 94 aa1.48□□□□□ -2.17
LMBR1-212ENST00000448926 LCE1FQ5T754 118 aa1.48□□□□□ -2.17
LMBR1-212ENST00000448926 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
LMBR1-212ENST00000448926 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
LMBR1-212ENST00000448926 MT1EP04732 61 aa1.47□□□□□ -2.17
LMBR1-212ENST00000448926 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
LMBR1-212ENST00000448926 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
LMBR1-212ENST00000448926 MT1LQ93083 61 aa1.46□□□□□ -2.18
LMBR1-212ENST00000448926 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
LMBR1-212ENST00000448926 LCE1AQ5T7P2 110 aa1.44□□□□□ -2.18
LMBR1-212ENST00000448926 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
LMBR1-212ENST00000448926 MT1GP13640 62 aa1.44□□□□□ -2.18
LMBR1-212ENST00000448926 MT3P25713 68 aa1.41□□□□□ -2.18
LMBR1-212ENST00000448926 INE1O15225 51 aa1.39□□□□□ -2.19
LMBR1-212ENST00000448926 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
LMBR1-212ENST00000448926 MT1MQ8N339 61 aa1.38□□□□□ -2.19
LMBR1-212ENST00000448926 KRTAP19-3Q7Z4W3 81 aa1.37□□□□□ -2.19
LMBR1-212ENST00000448926 LCE1EQ5T753 118 aa1.36□□□□□ -2.19
LMBR1-212ENST00000448926 KRTAP2-2Q9BYT5 123 aa1.36□□□□□ -2.19
LMBR1-212ENST00000448926 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.19
LMBR1-212ENST00000448926 SPRR2EP22531 72 aa1.32□□□□□ -2.2
LMBR1-212ENST00000448926 SPRR2BP35325 72 aa1.32□□□□□ -2.2
LMBR1-212ENST00000448926 SPRR2AP35326 72 aa1.32□□□□□ -2.2
LMBR1-212ENST00000448926 KRTAP2-3P0C7H8 128 aa1.3□□□□□ -2.2
LMBR1-212ENST00000448926 KRTAP2-4Q9BYR9 128 aa1.3□□□□□ -2.2
LMBR1-212ENST00000448926 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
LMBR1-212ENST00000448926 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.21
LMBR1-212ENST00000448926 SPRR2DP22532 72 aa1.25□□□□□ -2.21
LMBR1-212ENST00000448926 NEBP20929 6669 aa1.23□□□□□ -2.21
LMBR1-212ENST00000448926 KRTAP12-4P60329 112 aa1.21□□□□□ -2.22
LMBR1-212ENST00000448926 LCE3DQ9BYE3 92 aa1.21□□□□□ -2.22
LMBR1-212ENST00000448926 MT1AP04731 61 aa1.19□□□□□ -2.22
LMBR1-212ENST00000448926 KRTAP5-5Q701N2 237 aaPredicted RBP1.18□□□□□ -2.22
LMBR1-212ENST00000448926 MT4P47944 62 aa1.18□□□□□ -2.22
LMBR1-212ENST00000448926 KRTAP6-3Q3LI67 103 aa1.17□□□□□ -2.22
LMBR1-212ENST00000448926 KRTAP6-2Q3LI66 62 aa1.17□□□□□ -2.22
LMBR1-212ENST00000448926 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
LMBR1-212ENST00000448926 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
LMBR1-212ENST00000448926 PRM1P04553 51 aa1.08□□□□□ -2.24
LMBR1-212ENST00000448926 KRTAP20-1Q3LI63 56 aa1.07□□□□□ -2.24
LMBR1-212ENST00000448926 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
LMBR1-212ENST00000448926 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
LMBR1-212ENST00000448926 MUC5ACP98088 5654 aa0.99□□□□□ -2.25
LMBR1-212ENST00000448926 LCE1BQ5T7P3 118 aa0.99□□□□□ -2.25
LMBR1-212ENST00000448926 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
LMBR1-212ENST00000448926 LCE1CQ5T751 118 aa0.81□□□□□ -2.28
LMBR1-212ENST00000448926 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
LMBR1-212ENST00000448926 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
LMBR1-212ENST00000448926 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
LMBR1-212ENST00000448926 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 274.4 ms