RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
HLCS-205ENST00000448340 DSTQ03001 7570 aaKnown RBP6.57□□□□□ -1.36
HLCS-205ENST00000448340 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
HLCS-205ENST00000448340 MT1EP04732 61 aa6.52□□□□□ -1.37
HLCS-205ENST00000448340 ROMO1P60602 79 aa6.5□□□□□ -1.37
HLCS-205ENST00000448340 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
HLCS-205ENST00000448340 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
HLCS-205ENST00000448340 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
HLCS-205ENST00000448340 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
HLCS-205ENST00000448340 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
HLCS-205ENST00000448340 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
HLCS-205ENST00000448340 MT1GP13640 62 aa6.3□□□□□ -1.4
HLCS-205ENST00000448340 MT1LQ93083 61 aa6.3□□□□□ -1.4
HLCS-205ENST00000448340 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
HLCS-205ENST00000448340 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
HLCS-205ENST00000448340 HMCN1Q96RW7 5635 aa6.19□□□□□ -1.42
HLCS-205ENST00000448340 MT1MQ8N339 61 aa6.18□□□□□ -1.42
HLCS-205ENST00000448340 AHNAK2Q8IVF2 5795 aa6.13□□□□□ -1.43
HLCS-205ENST00000448340 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
HLCS-205ENST00000448340 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
HLCS-205ENST00000448340 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.43
HLCS-205ENST00000448340 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
HLCS-205ENST00000448340 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
HLCS-205ENST00000448340 MT4P47944 62 aa6.07□□□□□ -1.44
HLCS-205ENST00000448340 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
HLCS-205ENST00000448340 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
HLCS-205ENST00000448340 PRO0628Q9UI54 55 aa5.99□□□□□ -1.45
HLCS-205ENST00000448340 KRTAP5-4Q6L8H1 288 aa5.95□□□□□ -1.46
HLCS-205ENST00000448340 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
HLCS-205ENST00000448340 KRTAP4-6Q9BYQ5 205 aa5.91□□□□□ -1.46
HLCS-205ENST00000448340 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
HLCS-205ENST00000448340 KRTAP5-3Q6L8H2 238 aa5.81□□□□□ -1.48
HLCS-205ENST00000448340 SVIPQ8NHG7 77 aa5.81□□□□□ -1.48
HLCS-205ENST00000448340 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
HLCS-205ENST00000448340 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
HLCS-205ENST00000448340 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
HLCS-205ENST00000448340 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
HLCS-205ENST00000448340 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
HLCS-205ENST00000448340 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
HLCS-205ENST00000448340 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
HLCS-205ENST00000448340 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
HLCS-205ENST00000448340 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
HLCS-205ENST00000448340 MT1AP04731 61 aa5.37□□□□□ -1.55
HLCS-205ENST00000448340 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
HLCS-205ENST00000448340 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
HLCS-205ENST00000448340 MUC5ACP98088 5654 aa5.18□□□□□ -1.58
HLCS-205ENST00000448340 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
HLCS-205ENST00000448340 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
HLCS-205ENST00000448340 MUC5BQ9HC84 5762 aaPredicted RBP5.13□□□□□ -1.59
HLCS-205ENST00000448340 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
HLCS-205ENST00000448340 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
HLCS-205ENST00000448340 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
HLCS-205ENST00000448340 H3BS24 57 aa4.97□□□□□ -1.61
HLCS-205ENST00000448340 MT3P25713 68 aa4.9□□□□□ -1.63
HLCS-205ENST00000448340 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
HLCS-205ENST00000448340 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
HLCS-205ENST00000448340 LUZP6Q538Z0 58 aa4.81□□□□□ -1.64
HLCS-205ENST00000448340 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
HLCS-205ENST00000448340 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
HLCS-205ENST00000448340 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
HLCS-205ENST00000448340 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
HLCS-205ENST00000448340 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
HLCS-205ENST00000448340 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
HLCS-205ENST00000448340 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
HLCS-205ENST00000448340 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
HLCS-205ENST00000448340 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
HLCS-205ENST00000448340 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
HLCS-205ENST00000448340 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
HLCS-205ENST00000448340 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
HLCS-205ENST00000448340 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
HLCS-205ENST00000448340 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
HLCS-205ENST00000448340 INE1O15225 51 aa3.51□□□□□ -1.85
HLCS-205ENST00000448340 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
HLCS-205ENST00000448340 PRM1P04553 51 aa3.34□□□□□ -1.87
HLCS-205ENST00000448340 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
HLCS-205ENST00000448340 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
HLCS-205ENST00000448340 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
HLCS-205ENST00000448340 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 57.8 ms