RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
CTSS-202ENST00000448301 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
CTSS-202ENST00000448301 NEBP20929 6669 aa5.33□□□□□ -1.56
CTSS-202ENST00000448301 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
CTSS-202ENST00000448301 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
CTSS-202ENST00000448301 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
CTSS-202ENST00000448301 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
CTSS-202ENST00000448301 ROMO1P60602 79 aa5.23□□□□□ -1.57
CTSS-202ENST00000448301 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
CTSS-202ENST00000448301 SPRR2EP22531 72 aa5.23□□□□□ -1.57
CTSS-202ENST00000448301 SPRR2BP35325 72 aa5.23□□□□□ -1.57
CTSS-202ENST00000448301 SPRR2AP35326 72 aa5.23□□□□□ -1.57
CTSS-202ENST00000448301 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
CTSS-202ENST00000448301 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
CTSS-202ENST00000448301 MT1EP04732 61 aa5.19□□□□□ -1.58
CTSS-202ENST00000448301 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.15□□□□□ -1.58
CTSS-202ENST00000448301 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
CTSS-202ENST00000448301 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
CTSS-202ENST00000448301 SPRR2DP22532 72 aa5.05□□□□□ -1.6
CTSS-202ENST00000448301 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
CTSS-202ENST00000448301 MT1LQ93083 61 aa5.02□□□□□ -1.61
CTSS-202ENST00000448301 MT1GP13640 62 aa5□□□□□ -1.61
CTSS-202ENST00000448301 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
CTSS-202ENST00000448301 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
CTSS-202ENST00000448301 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
CTSS-202ENST00000448301 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
CTSS-202ENST00000448301 MT1MQ8N339 61 aa4.91□□□□□ -1.62
CTSS-202ENST00000448301 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
CTSS-202ENST00000448301 KRTAP5-11Q6L8G4 156 aa4.84□□□□□ -1.63
CTSS-202ENST00000448301 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
CTSS-202ENST00000448301 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
CTSS-202ENST00000448301 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
CTSS-202ENST00000448301 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
CTSS-202ENST00000448301 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
CTSS-202ENST00000448301 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
CTSS-202ENST00000448301 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
CTSS-202ENST00000448301 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
CTSS-202ENST00000448301 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
CTSS-202ENST00000448301 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
CTSS-202ENST00000448301 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
CTSS-202ENST00000448301 MT4P47944 62 aa4.38□□□□□ -1.71
CTSS-202ENST00000448301 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
CTSS-202ENST00000448301 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
CTSS-202ENST00000448301 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
CTSS-202ENST00000448301 MT1AP04731 61 aa4.29□□□□□ -1.72
CTSS-202ENST00000448301 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
CTSS-202ENST00000448301 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
CTSS-202ENST00000448301 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
CTSS-202ENST00000448301 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
CTSS-202ENST00000448301 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
CTSS-202ENST00000448301 MT3P25713 68 aa4.14□□□□□ -1.75
CTSS-202ENST00000448301 AHNAK2Q8IVF2 5795 aa4.03□□□□□ -1.76
CTSS-202ENST00000448301 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
CTSS-202ENST00000448301 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
CTSS-202ENST00000448301 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
CTSS-202ENST00000448301 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.77
CTSS-202ENST00000448301 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.78
CTSS-202ENST00000448301 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
CTSS-202ENST00000448301 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
CTSS-202ENST00000448301 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
CTSS-202ENST00000448301 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
CTSS-202ENST00000448301 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
CTSS-202ENST00000448301 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
CTSS-202ENST00000448301 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
CTSS-202ENST00000448301 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
CTSS-202ENST00000448301 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
CTSS-202ENST00000448301 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
CTSS-202ENST00000448301 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
CTSS-202ENST00000448301 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
CTSS-202ENST00000448301 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
CTSS-202ENST00000448301 INE1O15225 51 aa2.87□□□□□ -1.95
CTSS-202ENST00000448301 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
CTSS-202ENST00000448301 PRM1P04553 51 aa2.69□□□□□ -1.98
CTSS-202ENST00000448301 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
CTSS-202ENST00000448301 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
CTSS-202ENST00000448301 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
CTSS-202ENST00000448301 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 56.1 ms