RNA–Protein interactions for RNA: ENST00000447782.1

CCDC138-204, Transcript of coiled-coil domain containing 138, humanhuman

TSL 3

Gene CCDC138, Length 539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-204ENST00000447782 SPRR2DP22532 72 aa4.88□□□□□ -1.63
CCDC138-204ENST00000447782 GPR98Q8WXG9 6306 aa4.86□□□□□ -1.63
CCDC138-204ENST00000447782 UQCR11O14957 56 aa4.82□□□□□ -1.64
CCDC138-204ENST00000447782 PCP4P48539 62 aa4.82□□□□□ -1.64
CCDC138-204ENST00000447782 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
CCDC138-204ENST00000447782 PSPHP1O15172 72 aa4.79□□□□□ -1.64
CCDC138-204ENST00000447782 V9GYY9 64 aa4.78□□□□□ -1.64
CCDC138-204ENST00000447782 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
CCDC138-204ENST00000447782 Q1T7F1 81 aa4.74□□□□□ -1.65
CCDC138-204ENST00000447782 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
CCDC138-204ENST00000447782 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
CCDC138-204ENST00000447782 TNP1P09430 55 aa4.66□□□□□ -1.66
CCDC138-204ENST00000447782 A6NED7 52 aa4.63□□□□□ -1.67
CCDC138-204ENST00000447782 K7ERS5 55 aa4.63□□□□□ -1.67
CCDC138-204ENST00000447782 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
CCDC138-204ENST00000447782 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
CCDC138-204ENST00000447782 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
CCDC138-204ENST00000447782 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
CCDC138-204ENST00000447782 MT1EP04732 61 aa4.57□□□□□ -1.68
CCDC138-204ENST00000447782 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
CCDC138-204ENST00000447782 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
CCDC138-204ENST00000447782 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
CCDC138-204ENST00000447782 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
CCDC138-204ENST00000447782 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
CCDC138-204ENST00000447782 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
CCDC138-204ENST00000447782 MT1LQ93083 61 aa4.4□□□□□ -1.71
CCDC138-204ENST00000447782 MT1GP13640 62 aa4.39□□□□□ -1.71
CCDC138-204ENST00000447782 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
CCDC138-204ENST00000447782 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
CCDC138-204ENST00000447782 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
CCDC138-204ENST00000447782 MT1MQ8N339 61 aa4.35□□□□□ -1.71
CCDC138-204ENST00000447782 ROMO1P60602 79 aa4.33□□□□□ -1.72
CCDC138-204ENST00000447782 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
CCDC138-204ENST00000447782 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
CCDC138-204ENST00000447782 MT4P47944 62 aa4.25□□□□□ -1.73
CCDC138-204ENST00000447782 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
CCDC138-204ENST00000447782 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
CCDC138-204ENST00000447782 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
CCDC138-204ENST00000447782 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
CCDC138-204ENST00000447782 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
CCDC138-204ENST00000447782 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
CCDC138-204ENST00000447782 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
CCDC138-204ENST00000447782 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
CCDC138-204ENST00000447782 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
CCDC138-204ENST00000447782 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
CCDC138-204ENST00000447782 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
CCDC138-204ENST00000447782 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
CCDC138-204ENST00000447782 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
CCDC138-204ENST00000447782 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
CCDC138-204ENST00000447782 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
CCDC138-204ENST00000447782 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
CCDC138-204ENST00000447782 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
CCDC138-204ENST00000447782 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
CCDC138-204ENST00000447782 MT1AP04731 61 aa3.74□□□□□ -1.81
CCDC138-204ENST00000447782 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
CCDC138-204ENST00000447782 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
CCDC138-204ENST00000447782 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
CCDC138-204ENST00000447782 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
CCDC138-204ENST00000447782 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
CCDC138-204ENST00000447782 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
CCDC138-204ENST00000447782 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
CCDC138-204ENST00000447782 MT3P25713 68 aa3.55□□□□□ -1.84
CCDC138-204ENST00000447782 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CCDC138-204ENST00000447782 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
CCDC138-204ENST00000447782 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CCDC138-204ENST00000447782 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
CCDC138-204ENST00000447782 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
CCDC138-204ENST00000447782 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
CCDC138-204ENST00000447782 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
CCDC138-204ENST00000447782 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
CCDC138-204ENST00000447782 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CCDC138-204ENST00000447782 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
CCDC138-204ENST00000447782 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
CCDC138-204ENST00000447782 PRM1P04553 51 aa2.25□□□□□ -2.05
CCDC138-204ENST00000447782 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
CCDC138-204ENST00000447782 INE1O15225 51 aa2.14□□□□□ -2.07
CCDC138-204ENST00000447782 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
CCDC138-204ENST00000447782 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 30.1 ms