RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
SREBF1-207ENST00000447641 SPRR2DP22532 72 aa5.58□□□□□ -1.52
SREBF1-207ENST00000447641 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
SREBF1-207ENST00000447641 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
SREBF1-207ENST00000447641 GPR98Q8WXG9 6306 aa5.51□□□□□ -1.53
SREBF1-207ENST00000447641 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
SREBF1-207ENST00000447641 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
SREBF1-207ENST00000447641 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
SREBF1-207ENST00000447641 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
SREBF1-207ENST00000447641 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
SREBF1-207ENST00000447641 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
SREBF1-207ENST00000447641 MT1EP04732 61 aa5.23□□□□□ -1.57
SREBF1-207ENST00000447641 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
SREBF1-207ENST00000447641 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.58
SREBF1-207ENST00000447641 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
SREBF1-207ENST00000447641 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
SREBF1-207ENST00000447641 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
SREBF1-207ENST00000447641 AHNAK2Q8IVF2 5795 aa5.12□□□□□ -1.59
SREBF1-207ENST00000447641 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
SREBF1-207ENST00000447641 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
SREBF1-207ENST00000447641 MT1GP13640 62 aa5.06□□□□□ -1.6
SREBF1-207ENST00000447641 MT1LQ93083 61 aa5.04□□□□□ -1.6
SREBF1-207ENST00000447641 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
SREBF1-207ENST00000447641 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
SREBF1-207ENST00000447641 MT1MQ8N339 61 aa4.97□□□□□ -1.61
SREBF1-207ENST00000447641 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
SREBF1-207ENST00000447641 MT4P47944 62 aa4.92□□□□□ -1.62
SREBF1-207ENST00000447641 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
SREBF1-207ENST00000447641 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
SREBF1-207ENST00000447641 KRTAP5-7Q6L8G8 165 aa4.8□□□□□ -1.64
SREBF1-207ENST00000447641 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
SREBF1-207ENST00000447641 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
SREBF1-207ENST00000447641 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
SREBF1-207ENST00000447641 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
SREBF1-207ENST00000447641 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
SREBF1-207ENST00000447641 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
SREBF1-207ENST00000447641 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
SREBF1-207ENST00000447641 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
SREBF1-207ENST00000447641 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
SREBF1-207ENST00000447641 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
SREBF1-207ENST00000447641 H3BS24 57 aa4.53□□□□□ -1.68
SREBF1-207ENST00000447641 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
SREBF1-207ENST00000447641 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
SREBF1-207ENST00000447641 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
SREBF1-207ENST00000447641 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
SREBF1-207ENST00000447641 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
SREBF1-207ENST00000447641 MT1AP04731 61 aa4.29□□□□□ -1.72
SREBF1-207ENST00000447641 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
SREBF1-207ENST00000447641 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
SREBF1-207ENST00000447641 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
SREBF1-207ENST00000447641 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
SREBF1-207ENST00000447641 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
SREBF1-207ENST00000447641 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
SREBF1-207ENST00000447641 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
SREBF1-207ENST00000447641 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
SREBF1-207ENST00000447641 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
SREBF1-207ENST00000447641 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SREBF1-207ENST00000447641 MT3P25713 68 aa3.91□□□□□ -1.78
SREBF1-207ENST00000447641 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
SREBF1-207ENST00000447641 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
SREBF1-207ENST00000447641 INE1O15225 51 aa3.76□□□□□ -1.81
SREBF1-207ENST00000447641 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
SREBF1-207ENST00000447641 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
SREBF1-207ENST00000447641 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
SREBF1-207ENST00000447641 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
SREBF1-207ENST00000447641 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SREBF1-207ENST00000447641 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
SREBF1-207ENST00000447641 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
SREBF1-207ENST00000447641 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
SREBF1-207ENST00000447641 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
SREBF1-207ENST00000447641 PRM1P04553 51 aa2.95□□□□□ -1.94
SREBF1-207ENST00000447641 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
SREBF1-207ENST00000447641 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
SREBF1-207ENST00000447641 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
SREBF1-207ENST00000447641 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
SREBF1-207ENST00000447641 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SREBF1-207ENST00000447641 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
SREBF1-207ENST00000447641 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms