RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 TMEM258P61165 79 aa4.25□□□□□ -1.73
HLA-F-221ENST00000444621 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
HLA-F-221ENST00000444621 A8MU10 97 aa4.2□□□□□ -1.74
HLA-F-221ENST00000444621 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
HLA-F-221ENST00000444621 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
HLA-F-221ENST00000444621 UQCR11O14957 56 aa4.16□□□□□ -1.74
HLA-F-221ENST00000444621 TNP1P09430 55 aa4.15□□□□□ -1.75
HLA-F-221ENST00000444621 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.75
HLA-F-221ENST00000444621 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
HLA-F-221ENST00000444621 V9GYY9 64 aa4.1□□□□□ -1.75
HLA-F-221ENST00000444621 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
HLA-F-221ENST00000444621 MT1EP04732 61 aa4.09□□□□□ -1.75
HLA-F-221ENST00000444621 K7ERS5 55 aa4.08□□□□□ -1.76
HLA-F-221ENST00000444621 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
HLA-F-221ENST00000444621 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
HLA-F-221ENST00000444621 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
HLA-F-221ENST00000444621 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
HLA-F-221ENST00000444621 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
HLA-F-221ENST00000444621 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
HLA-F-221ENST00000444621 MT4P47944 62 aa4.04□□□□□ -1.76
HLA-F-221ENST00000444621 MT1GP13640 62 aa4.03□□□□□ -1.76
HLA-F-221ENST00000444621 LCE3AQ5TA76 89 aa4□□□□□ -1.77
HLA-F-221ENST00000444621 PSPHP1O15172 72 aa3.98□□□□□ -1.77
HLA-F-221ENST00000444621 Q1T7F1 81 aa3.98□□□□□ -1.77
HLA-F-221ENST00000444621 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
HLA-F-221ENST00000444621 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
HLA-F-221ENST00000444621 MT1LQ93083 61 aa3.93□□□□□ -1.78
HLA-F-221ENST00000444621 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
HLA-F-221ENST00000444621 A6NED7 52 aa3.9□□□□□ -1.79
HLA-F-221ENST00000444621 MT1MQ8N339 61 aa3.9□□□□□ -1.79
HLA-F-221ENST00000444621 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
HLA-F-221ENST00000444621 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
HLA-F-221ENST00000444621 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
HLA-F-221ENST00000444621 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
HLA-F-221ENST00000444621 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
HLA-F-221ENST00000444621 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
HLA-F-221ENST00000444621 ROMO1P60602 79 aa3.71□□□□□ -1.82
HLA-F-221ENST00000444621 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
HLA-F-221ENST00000444621 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
HLA-F-221ENST00000444621 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
HLA-F-221ENST00000444621 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
HLA-F-221ENST00000444621 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
HLA-F-221ENST00000444621 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
HLA-F-221ENST00000444621 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
HLA-F-221ENST00000444621 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
HLA-F-221ENST00000444621 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
HLA-F-221ENST00000444621 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
HLA-F-221ENST00000444621 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
HLA-F-221ENST00000444621 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
HLA-F-221ENST00000444621 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
HLA-F-221ENST00000444621 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
HLA-F-221ENST00000444621 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
HLA-F-221ENST00000444621 MT1AP04731 61 aa3.36□□□□□ -1.87
HLA-F-221ENST00000444621 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
HLA-F-221ENST00000444621 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
HLA-F-221ENST00000444621 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
HLA-F-221ENST00000444621 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
HLA-F-221ENST00000444621 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
HLA-F-221ENST00000444621 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
HLA-F-221ENST00000444621 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
HLA-F-221ENST00000444621 MT3P25713 68 aa3.12□□□□□ -1.91
HLA-F-221ENST00000444621 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
HLA-F-221ENST00000444621 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
HLA-F-221ENST00000444621 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
HLA-F-221ENST00000444621 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
HLA-F-221ENST00000444621 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
HLA-F-221ENST00000444621 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
HLA-F-221ENST00000444621 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
HLA-F-221ENST00000444621 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
HLA-F-221ENST00000444621 LCE1FQ5T754 118 aa2.57□□□□□ -2
HLA-F-221ENST00000444621 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
HLA-F-221ENST00000444621 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
HLA-F-221ENST00000444621 INE1O15225 51 aa2.28□□□□□ -2.04
HLA-F-221ENST00000444621 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
HLA-F-221ENST00000444621 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
HLA-F-221ENST00000444621 PRM1P04553 51 aa1.87□□□□□ -2.11
HLA-F-221ENST00000444621 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
HLA-F-221ENST00000444621 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 112.3 ms