RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 FSIP2Q5CZC0 6907 aa1.25□□□□□ -2.21
UBR3-206ENST00000444475 SYNE2Q8WXH0 6885 aaKnown RBP1.25□□□□□ -2.21
UBR3-206ENST00000444475 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
UBR3-206ENST00000444475 KRTAP19-6Q3LI70 58 aa1.24□□□□□ -2.21
UBR3-206ENST00000444475 TOMM7Q9P0U1 55 aa1.23□□□□□ -2.21
UBR3-206ENST00000444475 NOP10Q9NPE3 64 aaKnown RBP1.21□□□□□ -2.22
UBR3-206ENST00000444475 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
UBR3-206ENST00000444475 DEFB136Q30KP8 78 aa1.21□□□□□ -2.22
UBR3-206ENST00000444475 RPL39P5Q59GN2 51 aa1.21□□□□□ -2.22
UBR3-206ENST00000444475 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
UBR3-206ENST00000444475 KRTAP4-3Q9BYR4 195 aa1.2□□□□□ -2.22
UBR3-206ENST00000444475 SPINK1P00995 79 aa1.19□□□□□ -2.22
UBR3-206ENST00000444475 MT1HP80294 61 aa1.19□□□□□ -2.22
UBR3-206ENST00000444475 DEFB135Q30KP9 77 aa1.19□□□□□ -2.22
UBR3-206ENST00000444475 H3BNG1 76 aa1.19□□□□□ -2.22
UBR3-206ENST00000444475 KRTAP9-6A8MVA2 160 aa1.18□□□□□ -2.22
UBR3-206ENST00000444475 KMT2DO14686 5537 aa1.18□□□□□ -2.22
UBR3-206ENST00000444475 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
UBR3-206ENST00000444475 KRTAP5-5Q701N2 237 aaPredicted RBP1.17□□□□□ -2.22
UBR3-206ENST00000444475 SPINK6Q6UWN8 80 aa1.17□□□□□ -2.22
UBR3-206ENST00000444475 LPAP08519 4548 aa1.17□□□□□ -2.22
UBR3-206ENST00000444475 SPART-AS1P0CW21 52 aa1.16□□□□□ -2.22
UBR3-206ENST00000444475 KRTAP19-2Q3LHN2 52 aa1.16□□□□□ -2.22
UBR3-206ENST00000444475 M0QZ58 72 aa1.13□□□□□ -2.23
UBR3-206ENST00000444475 FLGP20930 4061 aaPredicted RBP1.13□□□□□ -2.23
UBR3-206ENST00000444475 APELAP0DMC3 54 aa1.1□□□□□ -2.23
UBR3-206ENST00000444475 LCE1CQ5T751 118 aa1.1□□□□□ -2.23
UBR3-206ENST00000444475 LCE1BQ5T7P3 118 aa1.1□□□□□ -2.23
UBR3-206ENST00000444475 MDN1Q9NU22 5596 aa1.09□□□□□ -2.23
UBR3-206ENST00000444475 MUC12Q9UKN1 5478 aa1.08□□□□□ -2.24
UBR3-206ENST00000444475 DEFB1P60022 68 aa1.08□□□□□ -2.24
UBR3-206ENST00000444475 DEFB4AO15263 64 aa1.07□□□□□ -2.24
UBR3-206ENST00000444475 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
UBR3-206ENST00000444475 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
UBR3-206ENST00000444475 SPRR2EP22531 72 aa1.05□□□□□ -2.24
UBR3-206ENST00000444475 SPRR2BP35325 72 aa1.05□□□□□ -2.24
UBR3-206ENST00000444475 SPRR2AP35326 72 aa1.05□□□□□ -2.24
UBR3-206ENST00000444475 LINC01556Q5JQF7 62 aa1.05□□□□□ -2.24
UBR3-206ENST00000444475 M0R2T5 61 aa1.04□□□□□ -2.24
UBR3-206ENST00000444475 SPRR2DP22532 72 aa1.04□□□□□ -2.24
UBR3-206ENST00000444475 A0A096LPF7 62 aa1.03□□□□□ -2.25
UBR3-206ENST00000444475 MT2AP02795 61 aa1.01□□□□□ -2.25
UBR3-206ENST00000444475 HTN3P15516 51 aa1.01□□□□□ -2.25
UBR3-206ENST00000444475 PRM1P04553 51 aa1□□□□□ -2.25
UBR3-206ENST00000444475 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
UBR3-206ENST00000444475 RHPN1-AS1Q9BWJ2 59 aa0.98□□□□□ -2.25
UBR3-206ENST00000444475 MT1FP04733 61 aa0.97□□□□□ -2.25
UBR3-206ENST00000444475 TNP1P09430 55 aa0.97□□□□□ -2.25
UBR3-206ENST00000444475 HTN1P15515 57 aa0.96□□□□□ -2.26
UBR3-206ENST00000444475 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
UBR3-206ENST00000444475 C9orf92A6NGG3 77 aa0.95□□□□□ -2.26
UBR3-206ENST00000444475 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
UBR3-206ENST00000444475 KRTAP8-1Q8IUC2 63 aa0.93□□□□□ -2.26
UBR3-206ENST00000444475 LCE3AQ5TA76 89 aa0.92□□□□□ -2.26
UBR3-206ENST00000444475 A0A096LNI7 61 aa0.9□□□□□ -2.26
UBR3-206ENST00000444475 MUC19Q7Z5P9 8384 aa0.89□□□□□ -2.27
UBR3-206ENST00000444475 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
UBR3-206ENST00000444475 DSTQ03001 7570 aaKnown RBP0.87□□□□□ -2.27
UBR3-206ENST00000444475 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
UBR3-206ENST00000444475 OBSCNQ5VST9 7968 aa0.87□□□□□ -2.27
UBR3-206ENST00000444475 KRTAP19-8Q3LI54 63 aa0.86□□□□□ -2.27
UBR3-206ENST00000444475 MT4P47944 62 aa0.84□□□□□ -2.28
UBR3-206ENST00000444475 MT1BP07438 61 aa0.83□□□□□ -2.28
UBR3-206ENST00000444475 KRTAP19-5Q3LI72 72 aa0.83□□□□□ -2.28
UBR3-206ENST00000444475 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
UBR3-206ENST00000444475 MT1AP04731 61 aa0.82□□□□□ -2.28
UBR3-206ENST00000444475 SPRR2GQ9BYE4 73 aa0.78□□□□□ -2.28
UBR3-206ENST00000444475 KRTAP6-2Q3LI66 62 aa0.76□□□□□ -2.29
UBR3-206ENST00000444475 MT1GP13640 62 aa0.7□□□□□ -2.3
UBR3-206ENST00000444475 MT1XP80297 61 aa0.68□□□□□ -2.3
UBR3-206ENST00000444475 MT1EP04732 61 aa0.65□□□□□ -2.31
UBR3-206ENST00000444475 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
UBR3-206ENST00000444475 MT1MQ8N339 61 aa0.64□□□□□ -2.31
UBR3-206ENST00000444475 KRTAP19-7Q3SYF9 63 aa0.62□□□□□ -2.31
UBR3-206ENST00000444475 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
UBR3-206ENST00000444475 KRTAP21-2Q3LI59 83 aa0.57□□□□□ -2.32
UBR3-206ENST00000444475 MT1LQ93083 61 aa0.55□□□□□ -2.32
UBR3-206ENST00000444475 KRTAP6-1Q3LI64 71 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms