RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 K7ERS5 55 aa8.06□□□□□ -1.12
HDLBP-220ENST00000442730 DSTQ03001 7570 aaKnown RBP8.01□□□□□ -1.13
HDLBP-220ENST00000442730 LCE3AQ5TA76 89 aa7.96□□□□□ -1.14
HDLBP-220ENST00000442730 MT1GP13640 62 aa7.95□□□□□ -1.14
HDLBP-220ENST00000442730 MT1LQ93083 61 aa7.9□□□□□ -1.14
HDLBP-220ENST00000442730 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
HDLBP-220ENST00000442730 MT1MQ8N339 61 aa7.85□□□□□ -1.15
HDLBP-220ENST00000442730 KRTAP25-1Q3LHN0 102 aa7.81□□□□□ -1.16
HDLBP-220ENST00000442730 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
HDLBP-220ENST00000442730 KRTAP4-9Q9BYQ8 210 aa7.73□□□□□ -1.17
HDLBP-220ENST00000442730 KRTAP4-3Q9BYR4 195 aa7.67□□□□□ -1.18
HDLBP-220ENST00000442730 KRTAP12-3P60328 96 aa7.65□□□□□ -1.18
HDLBP-220ENST00000442730 GPR98Q8WXG9 6306 aa7.65□□□□□ -1.19
HDLBP-220ENST00000442730 BRK1Q8WUW1 75 aa7.64□□□□□ -1.19
HDLBP-220ENST00000442730 LCE1DQ5T752 114 aa7.58□□□□□ -1.2
HDLBP-220ENST00000442730 ROMO1P60602 79 aa7.57□□□□□ -1.2
HDLBP-220ENST00000442730 LCE4AQ5TA78 99 aa7.57□□□□□ -1.2
HDLBP-220ENST00000442730 HMCN1Q96RW7 5635 aa7.51□□□□□ -1.21
HDLBP-220ENST00000442730 KRTAP4-7Q9BYR0 210 aa7.51□□□□□ -1.21
HDLBP-220ENST00000442730 KRTAP23-1A1A580 65 aa7.5□□□□□ -1.21
HDLBP-220ENST00000442730 MT4P47944 62 aa7.49□□□□□ -1.21
HDLBP-220ENST00000442730 KRTAP5-4Q6L8H1 288 aa7.47□□□□□ -1.21
HDLBP-220ENST00000442730 PRO0628Q9UI54 55 aa7.37□□□□□ -1.23
HDLBP-220ENST00000442730 H3BS24 57 aa7.33□□□□□ -1.24
HDLBP-220ENST00000442730 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
HDLBP-220ENST00000442730 LOC100996750A0A140TA64 210 aa7.24□□□□□ -1.25
HDLBP-220ENST00000442730 KRTAP15-1Q3LI76 137 aa7.24□□□□□ -1.25
HDLBP-220ENST00000442730 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
HDLBP-220ENST00000442730 KRTAP5-5Q701N2 237 aaPredicted RBP7.22□□□□□ -1.25
HDLBP-220ENST00000442730 AHNAK2Q8IVF2 5795 aa7.21□□□□□ -1.26
HDLBP-220ENST00000442730 KRTAP19-4Q3LI73 84 aa7.18□□□□□ -1.26
HDLBP-220ENST00000442730 LCE3CQ5T5A8 94 aa7.05□□□□□ -1.28
HDLBP-220ENST00000442730 KRTAP20-2Q3LI61 65 aa7.04□□□□□ -1.28
HDLBP-220ENST00000442730 KRTAP5-10Q6L8G5 202 aa7.03□□□□□ -1.28
HDLBP-220ENST00000442730 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
HDLBP-220ENST00000442730 KRTAP12-4P60329 112 aa6.97□□□□□ -1.29
HDLBP-220ENST00000442730 SYNE1Q8NF91 8797 aaKnown RBP6.89□□□□□ -1.31
HDLBP-220ENST00000442730 KRTAP5-3Q6L8H2 238 aa6.87□□□□□ -1.31
HDLBP-220ENST00000442730 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
HDLBP-220ENST00000442730 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
HDLBP-220ENST00000442730 KRTAP5-7Q6L8G8 165 aa6.74□□□□□ -1.33
HDLBP-220ENST00000442730 MT1AP04731 61 aa6.71□□□□□ -1.34
HDLBP-220ENST00000442730 KRTAP4-12Q9BQ66 201 aa6.7□□□□□ -1.34
HDLBP-220ENST00000442730 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
HDLBP-220ENST00000442730 KRTAP6-1Q3LI64 71 aa6.67□□□□□ -1.34
HDLBP-220ENST00000442730 KRTAP5-2Q701N4 177 aa6.56□□□□□ -1.36
HDLBP-220ENST00000442730 KRTAP9-4Q9BYQ2 154 aa6.46□□□□□ -1.38
HDLBP-220ENST00000442730 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
HDLBP-220ENST00000442730 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
HDLBP-220ENST00000442730 KRTAP6-2Q3LI66 62 aa6.37□□□□□ -1.39
HDLBP-220ENST00000442730 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
HDLBP-220ENST00000442730 KRTAP5-8O75690 187 aa6.2□□□□□ -1.42
HDLBP-220ENST00000442730 MT3P25713 68 aa6.11□□□□□ -1.43
HDLBP-220ENST00000442730 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
HDLBP-220ENST00000442730 AHNAKQ09666 5890 aaKnown RBP5.94□□□□□ -1.46
HDLBP-220ENST00000442730 MUC5ACP98088 5654 aa5.94□□□□□ -1.46
HDLBP-220ENST00000442730 MUC5BQ9HC84 5762 aaPredicted RBP5.94□□□□□ -1.46
HDLBP-220ENST00000442730 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
HDLBP-220ENST00000442730 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
HDLBP-220ENST00000442730 LUZP6Q538Z0 58 aa5.62□□□□□ -1.51
HDLBP-220ENST00000442730 LCE1EQ5T753 118 aa5.62□□□□□ -1.51
HDLBP-220ENST00000442730 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
HDLBP-220ENST00000442730 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
HDLBP-220ENST00000442730 LCE1CQ5T751 118 aa5.22□□□□□ -1.57
HDLBP-220ENST00000442730 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.59
HDLBP-220ENST00000442730 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
HDLBP-220ENST00000442730 LCE3EQ5T5B0 92 aa4.9□□□□□ -1.63
HDLBP-220ENST00000442730 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
HDLBP-220ENST00000442730 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
HDLBP-220ENST00000442730 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
HDLBP-220ENST00000442730 KRTAP21-2Q3LI59 83 aa4.41□□□□□ -1.7
HDLBP-220ENST00000442730 INE1O15225 51 aa4.38□□□□□ -1.71
HDLBP-220ENST00000442730 PHGR1C9JFL3 82 aa4.09□□□□□ -1.75
HDLBP-220ENST00000442730 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
HDLBP-220ENST00000442730 PRM1P04553 51 aa3.9□□□□□ -1.79
HDLBP-220ENST00000442730 MUC19Q7Z5P9 8384 aa3.76□□□□□ -1.81
HDLBP-220ENST00000442730 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.91
HDLBP-220ENST00000442730 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms