RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
TRIM13-205ENST00000442421 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
TRIM13-205ENST00000442421 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
TRIM13-205ENST00000442421 MT1MQ8N339 61 aa4.59□□□□□ -1.67
TRIM13-205ENST00000442421 TMEM258P61165 79 aa4.58□□□□□ -1.68
TRIM13-205ENST00000442421 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
TRIM13-205ENST00000442421 A0A0D9SG42 100 aa4.56□□□□□ -1.68
TRIM13-205ENST00000442421 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
TRIM13-205ENST00000442421 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
TRIM13-205ENST00000442421 MT1LQ93083 61 aa4.52□□□□□ -1.69
TRIM13-205ENST00000442421 SEC61GP60059 68 aa4.5□□□□□ -1.69
TRIM13-205ENST00000442421 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
TRIM13-205ENST00000442421 SERP1Q9Y6X1 66 aa4.48□□□□□ -1.69
TRIM13-205ENST00000442421 A0A1B0GU69 56 aa4.42□□□□□ -1.7
TRIM13-205ENST00000442421 A0A1B0GU33 70 aa4.41□□□□□ -1.7
TRIM13-205ENST00000442421 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
TRIM13-205ENST00000442421 SPINT4Q6UDR6 99 aa4.38□□□□□ -1.71
TRIM13-205ENST00000442421 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
TRIM13-205ENST00000442421 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
TRIM13-205ENST00000442421 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
TRIM13-205ENST00000442421 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
TRIM13-205ENST00000442421 SPATA8Q6RVD6 105 aa4.34□□□□□ -1.71
TRIM13-205ENST00000442421 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
TRIM13-205ENST00000442421 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
TRIM13-205ENST00000442421 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
TRIM13-205ENST00000442421 V9GYY9 64 aa4.29□□□□□ -1.72
TRIM13-205ENST00000442421 Q1T7F1 81 aa4.28□□□□□ -1.72
TRIM13-205ENST00000442421 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
TRIM13-205ENST00000442421 UQCR11O14957 56 aa4.24□□□□□ -1.73
TRIM13-205ENST00000442421 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
TRIM13-205ENST00000442421 A8MU10 97 aa4.21□□□□□ -1.74
TRIM13-205ENST00000442421 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
TRIM13-205ENST00000442421 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
TRIM13-205ENST00000442421 TNP1P09430 55 aa4.19□□□□□ -1.74
TRIM13-205ENST00000442421 PSPHP1O15172 72 aa4.14□□□□□ -1.75
TRIM13-205ENST00000442421 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
TRIM13-205ENST00000442421 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
TRIM13-205ENST00000442421 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
TRIM13-205ENST00000442421 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
TRIM13-205ENST00000442421 MT3P25713 68 aa4.08□□□□□ -1.76
TRIM13-205ENST00000442421 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
TRIM13-205ENST00000442421 A6NED7 52 aa4.03□□□□□ -1.76
TRIM13-205ENST00000442421 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
TRIM13-205ENST00000442421 K7ERS5 55 aa4.02□□□□□ -1.77
TRIM13-205ENST00000442421 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
TRIM13-205ENST00000442421 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
TRIM13-205ENST00000442421 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
TRIM13-205ENST00000442421 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
TRIM13-205ENST00000442421 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
TRIM13-205ENST00000442421 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
TRIM13-205ENST00000442421 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
TRIM13-205ENST00000442421 MT1AP04731 61 aa3.83□□□□□ -1.8
TRIM13-205ENST00000442421 ROMO1P60602 79 aa3.8□□□□□ -1.8
TRIM13-205ENST00000442421 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
TRIM13-205ENST00000442421 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
TRIM13-205ENST00000442421 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
TRIM13-205ENST00000442421 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
TRIM13-205ENST00000442421 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
TRIM13-205ENST00000442421 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
TRIM13-205ENST00000442421 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
TRIM13-205ENST00000442421 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
TRIM13-205ENST00000442421 PRO0628Q9UI54 55 aa3.46□□□□□ -1.86
TRIM13-205ENST00000442421 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
TRIM13-205ENST00000442421 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
TRIM13-205ENST00000442421 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
TRIM13-205ENST00000442421 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
TRIM13-205ENST00000442421 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
TRIM13-205ENST00000442421 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
TRIM13-205ENST00000442421 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
TRIM13-205ENST00000442421 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
TRIM13-205ENST00000442421 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
TRIM13-205ENST00000442421 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
TRIM13-205ENST00000442421 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
TRIM13-205ENST00000442421 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
TRIM13-205ENST00000442421 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
TRIM13-205ENST00000442421 INE1O15225 51 aa2.03□□□□□ -2.08
TRIM13-205ENST00000442421 PRM1P04553 51 aa1.92□□□□□ -2.1
TRIM13-205ENST00000442421 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 67.5 ms