RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 MT1EP04732 61 aa5.82□□□□□ -1.48
MCF2L-217ENST00000441756 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
MCF2L-217ENST00000441756 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
MCF2L-217ENST00000441756 MT1LQ93083 61 aa5.68□□□□□ -1.5
MCF2L-217ENST00000441756 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
MCF2L-217ENST00000441756 MDN1Q9NU22 5596 aa5.65□□□□□ -1.5
MCF2L-217ENST00000441756 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
MCF2L-217ENST00000441756 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
MCF2L-217ENST00000441756 SPRR2EP22531 72 aa5.63□□□□□ -1.51
MCF2L-217ENST00000441756 SPRR2BP35325 72 aa5.63□□□□□ -1.51
MCF2L-217ENST00000441756 SPRR2AP35326 72 aa5.63□□□□□ -1.51
MCF2L-217ENST00000441756 LCE1AQ5T7P2 110 aa5.61□□□□□ -1.51
MCF2L-217ENST00000441756 MT1GP13640 62 aa5.6□□□□□ -1.51
MCF2L-217ENST00000441756 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
MCF2L-217ENST00000441756 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
MCF2L-217ENST00000441756 MT1MQ8N339 61 aa5.5□□□□□ -1.53
MCF2L-217ENST00000441756 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
MCF2L-217ENST00000441756 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
MCF2L-217ENST00000441756 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
MCF2L-217ENST00000441756 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
MCF2L-217ENST00000441756 SPRR2DP22532 72 aa5.44□□□□□ -1.54
MCF2L-217ENST00000441756 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
MCF2L-217ENST00000441756 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
MCF2L-217ENST00000441756 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
MCF2L-217ENST00000441756 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
MCF2L-217ENST00000441756 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
MCF2L-217ENST00000441756 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
MCF2L-217ENST00000441756 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
MCF2L-217ENST00000441756 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
MCF2L-217ENST00000441756 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
MCF2L-217ENST00000441756 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
MCF2L-217ENST00000441756 MT1AP04731 61 aa4.86□□□□□ -1.63
MCF2L-217ENST00000441756 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
MCF2L-217ENST00000441756 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
MCF2L-217ENST00000441756 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
MCF2L-217ENST00000441756 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
MCF2L-217ENST00000441756 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
MCF2L-217ENST00000441756 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
MCF2L-217ENST00000441756 MT4P47944 62 aa4.71□□□□□ -1.66
MCF2L-217ENST00000441756 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
MCF2L-217ENST00000441756 AHNAK2Q8IVF2 5795 aa4.66□□□□□ -1.66
MCF2L-217ENST00000441756 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
MCF2L-217ENST00000441756 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
MCF2L-217ENST00000441756 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.68
MCF2L-217ENST00000441756 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
MCF2L-217ENST00000441756 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
MCF2L-217ENST00000441756 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
MCF2L-217ENST00000441756 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
MCF2L-217ENST00000441756 MT3P25713 68 aa4.43□□□□□ -1.7
MCF2L-217ENST00000441756 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
MCF2L-217ENST00000441756 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
MCF2L-217ENST00000441756 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
MCF2L-217ENST00000441756 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
MCF2L-217ENST00000441756 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
MCF2L-217ENST00000441756 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
MCF2L-217ENST00000441756 INE1O15225 51 aa4.02□□□□□ -1.77
MCF2L-217ENST00000441756 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
MCF2L-217ENST00000441756 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
MCF2L-217ENST00000441756 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
MCF2L-217ENST00000441756 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
MCF2L-217ENST00000441756 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
MCF2L-217ENST00000441756 H3BS24 57 aa3.89□□□□□ -1.79
MCF2L-217ENST00000441756 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
MCF2L-217ENST00000441756 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
MCF2L-217ENST00000441756 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
MCF2L-217ENST00000441756 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
MCF2L-217ENST00000441756 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
MCF2L-217ENST00000441756 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
MCF2L-217ENST00000441756 PRM1P04553 51 aa3.36□□□□□ -1.87
MCF2L-217ENST00000441756 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
MCF2L-217ENST00000441756 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
MCF2L-217ENST00000441756 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
MCF2L-217ENST00000441756 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
MCF2L-217ENST00000441756 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
MCF2L-217ENST00000441756 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
MCF2L-217ENST00000441756 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
MCF2L-217ENST00000441756 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
MCF2L-217ENST00000441756 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 89.3 ms