RNA–Protein interactions for RNA: ENST00000440697.5

CHD6-205, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-205ENST00000440697 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
CHD6-205ENST00000440697 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
CHD6-205ENST00000440697 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
CHD6-205ENST00000440697 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
CHD6-205ENST00000440697 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
CHD6-205ENST00000440697 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
CHD6-205ENST00000440697 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
CHD6-205ENST00000440697 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.91
CHD6-205ENST00000440697 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
CHD6-205ENST00000440697 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
CHD6-205ENST00000440697 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
CHD6-205ENST00000440697 TNP1P09430 55 aa3.11□□□□□ -1.91
CHD6-205ENST00000440697 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
CHD6-205ENST00000440697 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
CHD6-205ENST00000440697 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
CHD6-205ENST00000440697 NEBP20929 6669 aa3.08□□□□□ -1.92
CHD6-205ENST00000440697 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
CHD6-205ENST00000440697 SPRR2EP22531 72 aa3.03□□□□□ -1.92
CHD6-205ENST00000440697 SPRR2BP35325 72 aa3.03□□□□□ -1.92
CHD6-205ENST00000440697 SPRR2AP35326 72 aa3.03□□□□□ -1.92
CHD6-205ENST00000440697 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
CHD6-205ENST00000440697 MT1EP04732 61 aa3.01□□□□□ -1.93
CHD6-205ENST00000440697 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
CHD6-205ENST00000440697 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
CHD6-205ENST00000440697 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
CHD6-205ENST00000440697 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
CHD6-205ENST00000440697 SPRR2DP22532 72 aa2.92□□□□□ -1.94
CHD6-205ENST00000440697 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
CHD6-205ENST00000440697 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
CHD6-205ENST00000440697 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.94
CHD6-205ENST00000440697 MT1GP13640 62 aa2.9□□□□□ -1.94
CHD6-205ENST00000440697 MT1LQ93083 61 aa2.9□□□□□ -1.94
CHD6-205ENST00000440697 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.94
CHD6-205ENST00000440697 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
CHD6-205ENST00000440697 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
CHD6-205ENST00000440697 LCE3BQ5TA77 95 aa2.84□□□□□ -1.95
CHD6-205ENST00000440697 MT1MQ8N339 61 aa2.84□□□□□ -1.95
CHD6-205ENST00000440697 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
CHD6-205ENST00000440697 KRTAP2-1Q9BYU5 128 aa2.83□□□□□ -1.96
CHD6-205ENST00000440697 KRTAP4-7Q9BYR0 210 aa2.76□□□□□ -1.97
CHD6-205ENST00000440697 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
CHD6-205ENST00000440697 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
CHD6-205ENST00000440697 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
CHD6-205ENST00000440697 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
CHD6-205ENST00000440697 KRTAP4-9Q9BYQ8 210 aa2.58□□□□□ -2
CHD6-205ENST00000440697 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
CHD6-205ENST00000440697 MT4P47944 62 aa2.53□□□□□ -2
CHD6-205ENST00000440697 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
CHD6-205ENST00000440697 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
CHD6-205ENST00000440697 MT1AP04731 61 aa2.47□□□□□ -2.01
CHD6-205ENST00000440697 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
CHD6-205ENST00000440697 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
CHD6-205ENST00000440697 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
CHD6-205ENST00000440697 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
CHD6-205ENST00000440697 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
CHD6-205ENST00000440697 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
CHD6-205ENST00000440697 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.04
CHD6-205ENST00000440697 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
CHD6-205ENST00000440697 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
CHD6-205ENST00000440697 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
CHD6-205ENST00000440697 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
CHD6-205ENST00000440697 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
CHD6-205ENST00000440697 PRM1P04553 51 aa2.13□□□□□ -2.07
CHD6-205ENST00000440697 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
CHD6-205ENST00000440697 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
CHD6-205ENST00000440697 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
CHD6-205ENST00000440697 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
CHD6-205ENST00000440697 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
CHD6-205ENST00000440697 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
CHD6-205ENST00000440697 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
CHD6-205ENST00000440697 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
CHD6-205ENST00000440697 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
CHD6-205ENST00000440697 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
CHD6-205ENST00000440697 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
CHD6-205ENST00000440697 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
CHD6-205ENST00000440697 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
CHD6-205ENST00000440697 KRTAP4-4Q9BYR3 166 aa1.44□□□□□ -2.18
CHD6-205ENST00000440697 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 89.1 ms