RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 KRTAP2-1Q9BYU5 128 aa8.18□□□□□ -1.1
CNOT3-203ENST00000440571 KRTAP25-1Q3LHN0 102 aa8.17□□□□□ -1.1
CNOT3-203ENST00000440571 LCE3BQ5TA77 95 aa8.14□□□□□ -1.11
CNOT3-203ENST00000440571 MT1GP13640 62 aa8.08□□□□□ -1.12
CNOT3-203ENST00000440571 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
CNOT3-203ENST00000440571 MT1LQ93083 61 aa8.03□□□□□ -1.12
CNOT3-203ENST00000440571 PP632Q6XCG6 107 aa8.02□□□□□ -1.13
CNOT3-203ENST00000440571 KRTAP12-3P60328 96 aa8□□□□□ -1.13
CNOT3-203ENST00000440571 MT1MQ8N339 61 aa7.92□□□□□ -1.14
CNOT3-203ENST00000440571 ROMO1P60602 79 aa7.9□□□□□ -1.14
CNOT3-203ENST00000440571 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
CNOT3-203ENST00000440571 DSTQ03001 7570 aaKnown RBP7.88□□□□□ -1.15
CNOT3-203ENST00000440571 KRTAP4-3Q9BYR4 195 aa7.73□□□□□ -1.17
CNOT3-203ENST00000440571 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
CNOT3-203ENST00000440571 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
CNOT3-203ENST00000440571 KRTAP19-4Q3LI73 84 aa7.6□□□□□ -1.19
CNOT3-203ENST00000440571 BRK1Q8WUW1 75 aa7.55□□□□□ -1.2
CNOT3-203ENST00000440571 KRTAP4-9Q9BYQ8 210 aa7.49□□□□□ -1.21
CNOT3-203ENST00000440571 LCE4AQ5TA78 99 aa7.45□□□□□ -1.22
CNOT3-203ENST00000440571 LCE3CQ5T5A8 94 aa7.41□□□□□ -1.22
CNOT3-203ENST00000440571 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
CNOT3-203ENST00000440571 KRTAP5-4Q6L8H1 288 aa7.34□□□□□ -1.23
CNOT3-203ENST00000440571 MT4P47944 62 aa7.33□□□□□ -1.24
CNOT3-203ENST00000440571 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
CNOT3-203ENST00000440571 KRTAP5-5Q701N2 237 aaPredicted RBP7.2□□□□□ -1.26
CNOT3-203ENST00000440571 HMCN1Q96RW7 5635 aa7.15□□□□□ -1.26
CNOT3-203ENST00000440571 PMAIP1Q13794 54 aa7.14□□□□□ -1.27
CNOT3-203ENST00000440571 KRTAP4-6Q9BYQ5 205 aa7.14□□□□□ -1.27
CNOT3-203ENST00000440571 KRTAP12-4P60329 112 aa7.01□□□□□ -1.29
CNOT3-203ENST00000440571 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
CNOT3-203ENST00000440571 KRTAP9-6A8MVA2 160 aa6.93□□□□□ -1.3
CNOT3-203ENST00000440571 KRTAP20-2Q3LI61 65 aa6.92□□□□□ -1.3
CNOT3-203ENST00000440571 GPR98Q8WXG9 6306 aa6.91□□□□□ -1.3
CNOT3-203ENST00000440571 PRO0628Q9UI54 55 aa6.87□□□□□ -1.31
CNOT3-203ENST00000440571 SYNE1Q8NF91 8797 aaKnown RBP6.86□□□□□ -1.31
CNOT3-203ENST00000440571 MT1AP04731 61 aa6.84□□□□□ -1.31
CNOT3-203ENST00000440571 KRTAP6-1Q3LI64 71 aa6.78□□□□□ -1.32
CNOT3-203ENST00000440571 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
CNOT3-203ENST00000440571 AHNAK2Q8IVF2 5795 aa6.75□□□□□ -1.33
CNOT3-203ENST00000440571 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
CNOT3-203ENST00000440571 KRTAP5-10Q6L8G5 202 aa6.62□□□□□ -1.35
CNOT3-203ENST00000440571 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
CNOT3-203ENST00000440571 SVIPQ8NHG7 77 aa6.55□□□□□ -1.36
CNOT3-203ENST00000440571 KRTAP5-2Q701N4 177 aa6.48□□□□□ -1.37
CNOT3-203ENST00000440571 KTN1-AS1Q86SY8 53 aa6.48□□□□□ -1.37
CNOT3-203ENST00000440571 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
CNOT3-203ENST00000440571 KRTAP5-7Q6L8G8 165 aa6.33□□□□□ -1.4
CNOT3-203ENST00000440571 MT3P25713 68 aa6.28□□□□□ -1.4
CNOT3-203ENST00000440571 KRTAP4-11Q9BYQ6 195 aa6.25□□□□□ -1.41
CNOT3-203ENST00000440571 KRTAP5-8O75690 187 aa6.01□□□□□ -1.45
CNOT3-203ENST00000440571 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
CNOT3-203ENST00000440571 KRTAP5-1Q6L8H4 278 aa5.76□□□□□ -1.49
CNOT3-203ENST00000440571 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
CNOT3-203ENST00000440571 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
CNOT3-203ENST00000440571 LCE1EQ5T753 118 aa5.66□□□□□ -1.5
CNOT3-203ENST00000440571 MUC5ACP98088 5654 aa5.58□□□□□ -1.52
CNOT3-203ENST00000440571 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
CNOT3-203ENST00000440571 AHNAKQ09666 5890 aaKnown RBP5.44□□□□□ -1.54
CNOT3-203ENST00000440571 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
CNOT3-203ENST00000440571 LCE1BQ5T7P3 118 aa5.34□□□□□ -1.55
CNOT3-203ENST00000440571 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
CNOT3-203ENST00000440571 LCE1CQ5T751 118 aa5.25□□□□□ -1.57
CNOT3-203ENST00000440571 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
CNOT3-203ENST00000440571 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
CNOT3-203ENST00000440571 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
CNOT3-203ENST00000440571 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
CNOT3-203ENST00000440571 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
CNOT3-203ENST00000440571 H3BS24 57 aa4.6□□□□□ -1.67
CNOT3-203ENST00000440571 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
CNOT3-203ENST00000440571 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
CNOT3-203ENST00000440571 KRTAP21-2Q3LI59 83 aa4.45□□□□□ -1.7
CNOT3-203ENST00000440571 PHGR1C9JFL3 82 aa4.06□□□□□ -1.76
CNOT3-203ENST00000440571 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
CNOT3-203ENST00000440571 PRM1P04553 51 aa4.05□□□□□ -1.76
CNOT3-203ENST00000440571 INE1O15225 51 aa4.01□□□□□ -1.77
CNOT3-203ENST00000440571 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
CNOT3-203ENST00000440571 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
CNOT3-203ENST00000440571 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 201.8 ms