RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
CPSF4-205ENST00000440514 KRTAP19-3Q7Z4W3 81 aa6.58□□□□□ -1.36
CPSF4-205ENST00000440514 LCE5AQ5TCM9 118 aa6.57□□□□□ -1.36
CPSF4-205ENST00000440514 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
CPSF4-205ENST00000440514 KRTAP2-2Q9BYT5 123 aa6.54□□□□□ -1.36
CPSF4-205ENST00000440514 KRTAP2-1Q9BYU5 128 aa6.54□□□□□ -1.36
CPSF4-205ENST00000440514 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
CPSF4-205ENST00000440514 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
CPSF4-205ENST00000440514 MT1LQ93083 61 aa6.45□□□□□ -1.38
CPSF4-205ENST00000440514 ROMO1P60602 79 aa6.44□□□□□ -1.38
CPSF4-205ENST00000440514 MT1GP13640 62 aa6.43□□□□□ -1.38
CPSF4-205ENST00000440514 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
CPSF4-205ENST00000440514 MT1MQ8N339 61 aa6.37□□□□□ -1.39
CPSF4-205ENST00000440514 DSTQ03001 7570 aaKnown RBP6.32□□□□□ -1.4
CPSF4-205ENST00000440514 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
CPSF4-205ENST00000440514 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
CPSF4-205ENST00000440514 BRK1Q8WUW1 75 aa6.23□□□□□ -1.41
CPSF4-205ENST00000440514 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
CPSF4-205ENST00000440514 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
CPSF4-205ENST00000440514 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
CPSF4-205ENST00000440514 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
CPSF4-205ENST00000440514 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
CPSF4-205ENST00000440514 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
CPSF4-205ENST00000440514 H3BS24 57 aa5.92□□□□□ -1.46
CPSF4-205ENST00000440514 PMAIP1Q13794 54 aa5.92□□□□□ -1.46
CPSF4-205ENST00000440514 MT4P47944 62 aa5.91□□□□□ -1.46
CPSF4-205ENST00000440514 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
CPSF4-205ENST00000440514 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.46
CPSF4-205ENST00000440514 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
CPSF4-205ENST00000440514 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
CPSF4-205ENST00000440514 PRO0628Q9UI54 55 aa5.76□□□□□ -1.49
CPSF4-205ENST00000440514 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
CPSF4-205ENST00000440514 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
CPSF4-205ENST00000440514 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.5
CPSF4-205ENST00000440514 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
CPSF4-205ENST00000440514 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
CPSF4-205ENST00000440514 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
CPSF4-205ENST00000440514 AHNAK2Q8IVF2 5795 aa5.57□□□□□ -1.52
CPSF4-205ENST00000440514 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
CPSF4-205ENST00000440514 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
CPSF4-205ENST00000440514 MT1AP04731 61 aa5.49□□□□□ -1.53
CPSF4-205ENST00000440514 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
CPSF4-205ENST00000440514 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
CPSF4-205ENST00000440514 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
CPSF4-205ENST00000440514 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
CPSF4-205ENST00000440514 KRTAP5-10Q6L8G5 202 aa5.38□□□□□ -1.55
CPSF4-205ENST00000440514 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
CPSF4-205ENST00000440514 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
CPSF4-205ENST00000440514 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
CPSF4-205ENST00000440514 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
CPSF4-205ENST00000440514 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
CPSF4-205ENST00000440514 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
CPSF4-205ENST00000440514 MT3P25713 68 aa5.01□□□□□ -1.61
CPSF4-205ENST00000440514 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
CPSF4-205ENST00000440514 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
CPSF4-205ENST00000440514 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
CPSF4-205ENST00000440514 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
CPSF4-205ENST00000440514 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
CPSF4-205ENST00000440514 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
CPSF4-205ENST00000440514 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
CPSF4-205ENST00000440514 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
CPSF4-205ENST00000440514 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
CPSF4-205ENST00000440514 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
CPSF4-205ENST00000440514 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
CPSF4-205ENST00000440514 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
CPSF4-205ENST00000440514 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
CPSF4-205ENST00000440514 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
CPSF4-205ENST00000440514 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
CPSF4-205ENST00000440514 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
CPSF4-205ENST00000440514 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
CPSF4-205ENST00000440514 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
CPSF4-205ENST00000440514 INE1O15225 51 aa3.44□□□□□ -1.86
CPSF4-205ENST00000440514 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
CPSF4-205ENST00000440514 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
CPSF4-205ENST00000440514 PRM1P04553 51 aa3.23□□□□□ -1.89
CPSF4-205ENST00000440514 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
CPSF4-205ENST00000440514 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
CPSF4-205ENST00000440514 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms