RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	KRTAP19-3	Q7Z4W3	81 aa		6.1	□□□□□ -1.43
LAMB1-205	ENST00000439976	MT1E	P04732	61 aa		6.08	□□□□□ -1.44
LAMB1-205	ENST00000439976	HMCN1	Q96RW7	5635 aa		6.08	□□□□□ -1.44
LAMB1-205	ENST00000439976	BRK1	Q8WUW1	75 aa		6.07	□□□□□ -1.44
LAMB1-205	ENST00000439976	AHNAK2	Q8IVF2	5795 aa		6.06	□□□□□ -1.44
LAMB1-205	ENST00000439976	CAMK2N1	Q7Z7J9	78 aa		6.03	□□□□□ -1.44
LAMB1-205	ENST00000439976	MT4	P47944	62 aa		5.96	□□□□□ -1.46
LAMB1-205	ENST00000439976	LCE4A	Q5TA78	99 aa		5.95	□□□□□ -1.46
LAMB1-205	ENST00000439976	KRTAP5-10	Q6L8G5	202 aa		5.91	□□□□□ -1.46
LAMB1-205	ENST00000439976	MT1G	P13640	62 aa		5.9	□□□□□ -1.46
LAMB1-205	ENST00000439976	PRO0628	Q9UI54	55 aa		5.86	□□□□□ -1.47
LAMB1-205	ENST00000439976	KRTAP19-5	Q3LI72	72 aa		5.84	□□□□□ -1.47
LAMB1-205	ENST00000439976	KRTAP5-4	Q6L8H1	288 aa		5.82	□□□□□ -1.48
LAMB1-205	ENST00000439976	MT1M	Q8N339	61 aa		5.82	□□□□□ -1.48
LAMB1-205	ENST00000439976	PP632	Q6XCG6	107 aa		5.8	□□□□□ -1.48
LAMB1-205	ENST00000439976	KRTAP4-6	Q9BYQ5	205 aa		5.8	□□□□□ -1.48
LAMB1-205	ENST00000439976	PMAIP1	Q13794	54 aa		5.77	□□□□□ -1.49
LAMB1-205	ENST00000439976	ROMO1	P60602	79 aa		5.76	□□□□□ -1.49
LAMB1-205	ENST00000439976	C10orf95	Q9H7T3	257 aa		5.76	□□□□□ -1.49
LAMB1-205	ENST00000439976	MT1L	Q93083	61 aa		5.74	□□□□□ -1.49
LAMB1-205	ENST00000439976	KRTAP5-7	Q6L8G8	165 aa		5.73	□□□□□ -1.49
LAMB1-205	ENST00000439976	KRTAP4-3	Q9BYR4	195 aa		5.73	□□□□□ -1.49
LAMB1-205	ENST00000439976	TNP1	P09430	55 aa		5.71	□□□□□ -1.5
LAMB1-205	ENST00000439976	KRTAP25-1	Q3LHN0	102 aa		5.67	□□□□□ -1.5
LAMB1-205	ENST00000439976	KRTAP5-3	Q6L8H2	238 aa		5.66	□□□□□ -1.5
LAMB1-205	ENST00000439976	KRTAP20-2	Q3LI61	65 aa		5.51	□□□□□ -1.53
LAMB1-205	ENST00000439976	KRTAP23-1	A1A580	65 aa		5.5	□□□□□ -1.53
LAMB1-205	ENST00000439976	LCE3A	Q5TA76	89 aa		5.48	□□□□□ -1.53
LAMB1-205	ENST00000439976	KRTAP4-7	Q9BYR0	210 aa		5.47	□□□□□ -1.53
LAMB1-205	ENST00000439976	KTN1-AS1	Q86SY8	53 aa		5.45	□□□□□ -1.54
LAMB1-205	ENST00000439976	SPRR5	A0A1B0GTR4	108 aa		5.42	□□□□□ -1.54
LAMB1-205	ENST00000439976	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.42	□□□□□ -1.54
LAMB1-205	ENST00000439976	PRAC1	Q96KF2	57 aa		5.33	□□□□□ -1.56
LAMB1-205	ENST00000439976	SYNE1	Q8NF91	8797 aa	Known RBP	5.29	□□□□□ -1.56
LAMB1-205	ENST00000439976	KRTAP12-4	P60329	112 aa		5.29	□□□□□ -1.56
LAMB1-205	ENST00000439976	KRTAP12-3	P60328	96 aa		5.25	□□□□□ -1.57
LAMB1-205	ENST00000439976	LOC100996750	A0A140TA64	210 aa		5.2	□□□□□ -1.58
LAMB1-205	ENST00000439976	SVIP	Q8NHG7	77 aa		5.15	□□□□□ -1.59
LAMB1-205	ENST00000439976	KRTAP4-11	Q9BYQ6	195 aa		5.13	□□□□□ -1.59
LAMB1-205	ENST00000439976	KRTAP15-1	Q3LI76	137 aa		5.11	□□□□□ -1.59
LAMB1-205	ENST00000439976	AHNAK	Q09666	5890 aa	Known RBP	5.08	□□□□□ -1.6
LAMB1-205	ENST00000439976	KRTAP19-4	Q3LI73	84 aa		5.07	□□□□□ -1.6
LAMB1-205	ENST00000439976	KRTAP5-2	Q701N4	177 aa		5.04	□□□□□ -1.6
LAMB1-205	ENST00000439976	MUC5AC	P98088	5654 aa		5.04	□□□□□ -1.6
LAMB1-205	ENST00000439976	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.01	□□□□□ -1.61
LAMB1-205	ENST00000439976	KRTAP5-8	O75690	187 aa		4.99	□□□□□ -1.61
LAMB1-205	ENST00000439976	KRTAP6-1	Q3LI64	71 aa		4.89	□□□□□ -1.63
LAMB1-205	ENST00000439976	LCE3C	Q5T5A8	94 aa		4.89	□□□□□ -1.63
LAMB1-205	ENST00000439976	MT1A	P04731	61 aa		4.86	□□□□□ -1.63
LAMB1-205	ENST00000439976	OBSCN	Q5VST9	7968 aa		4.8	□□□□□ -1.64
LAMB1-205	ENST00000439976	KRTAP9-4	Q9BYQ2	154 aa		4.75	□□□□□ -1.65
LAMB1-205	ENST00000439976	KRTAP6-2	Q3LI66	62 aa		4.74	□□□□□ -1.65
LAMB1-205	ENST00000439976	KRTAP9-9	Q9BYP9	154 aa		4.74	□□□□□ -1.65
LAMB1-205	ENST00000439976	KRTAP9-6	A8MVA2	160 aa		4.62	□□□□□ -1.67
LAMB1-205	ENST00000439976	KRTAP5-1	Q6L8H4	278 aa		4.6	□□□□□ -1.67
LAMB1-205	ENST00000439976	LUZP6	Q538Z0	58 aa		4.53	□□□□□ -1.68
LAMB1-205	ENST00000439976	MT3	P25713	68 aa		4.44	□□□□□ -1.7
LAMB1-205	ENST00000439976	LCE1E	Q5T753	118 aa		4.2	□□□□□ -1.74
LAMB1-205	ENST00000439976	NDUFAF8	A1L188	74 aa		4.17	□□□□□ -1.74
LAMB1-205	ENST00000439976	KRTAP4-2	Q9BYR5	136 aa		4.07	□□□□□ -1.76
LAMB1-205	ENST00000439976	LCE1B	Q5T7P3	118 aa		3.97	□□□□□ -1.77
LAMB1-205	ENST00000439976	LCE1C	Q5T751	118 aa		3.91	□□□□□ -1.78
LAMB1-205	ENST00000439976	KRTAP4-12	Q9BQ66	201 aa		3.81	□□□□□ -1.8
LAMB1-205	ENST00000439976		A0A0A0MQY5	61 aa		3.7	□□□□□ -1.82
LAMB1-205	ENST00000439976	LCE3D	Q9BYE3	92 aa		3.66	□□□□□ -1.82
LAMB1-205	ENST00000439976	KRTAP5-11	Q6L8G4	156 aa		3.64	□□□□□ -1.83
LAMB1-205	ENST00000439976	LCE1F	Q5T754	118 aa		3.56	□□□□□ -1.84
LAMB1-205	ENST00000439976	LCE3E	Q5T5B0	92 aa		3.54	□□□□□ -1.84
LAMB1-205	ENST00000439976	INE1	O15225	51 aa		3.52	□□□□□ -1.85
LAMB1-205	ENST00000439976	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.52	□□□□□ -1.85
LAMB1-205	ENST00000439976	PHGR1	C9JFL3	82 aa		3.42	□□□□□ -1.86
LAMB1-205	ENST00000439976		H3BS24	57 aa		3.28	□□□□□ -1.88
LAMB1-205	ENST00000439976	KRTAP21-2	Q3LI59	83 aa		3.24	□□□□□ -1.89
LAMB1-205	ENST00000439976	KRTAP4-4	Q9BYR3	166 aa		3.02	□□□□□ -1.93
LAMB1-205	ENST00000439976	MUC19	Q7Z5P9	8384 aa		3.01	□□□□□ -1.93
LAMB1-205	ENST00000439976	PRM1	P04553	51 aa		2.95	□□□□□ -1.94
LAMB1-205	ENST00000439976	KRTAP21-1	Q3LI58	79 aa		2.6	□□□□□ -1.99
LAMB1-205	ENST00000439976	MUC16	Q8WXI7	14507 aa		2.12	□□□□□ -2.07

Retrieved 78 of 20,778 RNA–protein pairs in 102.2 ms