RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 KRTAP19-3Q7Z4W3 81 aa7.09□□□□□ -1.27
SEMA3B-206ENST00000439487 LCE5AQ5TCM9 118 aa7.06□□□□□ -1.28
SEMA3B-206ENST00000439487 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
SEMA3B-206ENST00000439487 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
SEMA3B-206ENST00000439487 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
SEMA3B-206ENST00000439487 MT1GP13640 62 aa6.95□□□□□ -1.3
SEMA3B-206ENST00000439487 MT1LQ93083 61 aa6.95□□□□□ -1.3
SEMA3B-206ENST00000439487 DSTQ03001 7570 aaKnown RBP6.93□□□□□ -1.3
SEMA3B-206ENST00000439487 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
SEMA3B-206ENST00000439487 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
SEMA3B-206ENST00000439487 MT1MQ8N339 61 aa6.86□□□□□ -1.31
SEMA3B-206ENST00000439487 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
SEMA3B-206ENST00000439487 ROMO1P60602 79 aa6.82□□□□□ -1.32
SEMA3B-206ENST00000439487 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
SEMA3B-206ENST00000439487 KRTAP4-3Q9BYR4 195 aa6.72□□□□□ -1.33
SEMA3B-206ENST00000439487 HMCN1Q96RW7 5635 aa6.72□□□□□ -1.33
SEMA3B-206ENST00000439487 AHNAK2Q8IVF2 5795 aa6.68□□□□□ -1.34
SEMA3B-206ENST00000439487 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
SEMA3B-206ENST00000439487 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
SEMA3B-206ENST00000439487 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
SEMA3B-206ENST00000439487 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
SEMA3B-206ENST00000439487 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
SEMA3B-206ENST00000439487 PRO0628Q9UI54 55 aa6.51□□□□□ -1.37
SEMA3B-206ENST00000439487 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
SEMA3B-206ENST00000439487 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
SEMA3B-206ENST00000439487 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
SEMA3B-206ENST00000439487 KRTAP5-7Q6L8G8 165 aa6.4□□□□□ -1.38
SEMA3B-206ENST00000439487 MT4P47944 62 aa6.34□□□□□ -1.39
SEMA3B-206ENST00000439487 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
SEMA3B-206ENST00000439487 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
SEMA3B-206ENST00000439487 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
SEMA3B-206ENST00000439487 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
SEMA3B-206ENST00000439487 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
SEMA3B-206ENST00000439487 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
SEMA3B-206ENST00000439487 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
SEMA3B-206ENST00000439487 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
SEMA3B-206ENST00000439487 SYNE1Q8NF91 8797 aaKnown RBP6.05□□□□□ -1.44
SEMA3B-206ENST00000439487 KRTAP9-6A8MVA2 160 aa6.04□□□□□ -1.44
SEMA3B-206ENST00000439487 KRTAP12-4P60329 112 aa6□□□□□ -1.45
SEMA3B-206ENST00000439487 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
SEMA3B-206ENST00000439487 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
SEMA3B-206ENST00000439487 MT1AP04731 61 aa5.92□□□□□ -1.46
SEMA3B-206ENST00000439487 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
SEMA3B-206ENST00000439487 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
SEMA3B-206ENST00000439487 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
SEMA3B-206ENST00000439487 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
SEMA3B-206ENST00000439487 MUC5ACP98088 5654 aa5.69□□□□□ -1.5
SEMA3B-206ENST00000439487 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
SEMA3B-206ENST00000439487 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
SEMA3B-206ENST00000439487 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
SEMA3B-206ENST00000439487 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
SEMA3B-206ENST00000439487 MT3P25713 68 aa5.39□□□□□ -1.55
SEMA3B-206ENST00000439487 KRTAP5-8O75690 187 aa5.37□□□□□ -1.55
SEMA3B-206ENST00000439487 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
SEMA3B-206ENST00000439487 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
SEMA3B-206ENST00000439487 KRTAP5-1Q6L8H4 278 aa4.98□□□□□ -1.61
SEMA3B-206ENST00000439487 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
SEMA3B-206ENST00000439487 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
SEMA3B-206ENST00000439487 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
SEMA3B-206ENST00000439487 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
SEMA3B-206ENST00000439487 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
SEMA3B-206ENST00000439487 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.67
SEMA3B-206ENST00000439487 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
SEMA3B-206ENST00000439487 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
SEMA3B-206ENST00000439487 H3BS24 57 aa4.22□□□□□ -1.73
SEMA3B-206ENST00000439487 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
SEMA3B-206ENST00000439487 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
SEMA3B-206ENST00000439487 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
SEMA3B-206ENST00000439487 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
SEMA3B-206ENST00000439487 INE1O15225 51 aa3.89□□□□□ -1.79
SEMA3B-206ENST00000439487 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
SEMA3B-206ENST00000439487 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
SEMA3B-206ENST00000439487 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
SEMA3B-206ENST00000439487 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
SEMA3B-206ENST00000439487 PRM1P04553 51 aa3.52□□□□□ -1.85
SEMA3B-206ENST00000439487 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.89
SEMA3B-206ENST00000439487 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
SEMA3B-206ENST00000439487 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms