RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 LCE1DQ5T752 114 aa6.89□□□□□ -1.31
UBXN1-203ENST00000436354 KRTAP19-7Q3SYF9 63 aa6.88□□□□□ -1.31
UBXN1-203ENST00000436354 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
UBXN1-203ENST00000436354 MT1EP04732 61 aa6.85□□□□□ -1.31
UBXN1-203ENST00000436354 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
UBXN1-203ENST00000436354 MT4P47944 62 aa6.75□□□□□ -1.33
UBXN1-203ENST00000436354 TNP1P09430 55 aa6.72□□□□□ -1.33
UBXN1-203ENST00000436354 MT1GP13640 62 aa6.7□□□□□ -1.34
UBXN1-203ENST00000436354 HMCN1Q96RW7 5635 aa6.67□□□□□ -1.34
UBXN1-203ENST00000436354 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
UBXN1-203ENST00000436354 KRTAP5-10Q6L8G5 202 aa6.64□□□□□ -1.35
UBXN1-203ENST00000436354 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
UBXN1-203ENST00000436354 BRK1Q8WUW1 75 aa6.62□□□□□ -1.35
UBXN1-203ENST00000436354 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
UBXN1-203ENST00000436354 AHNAK2Q8IVF2 5795 aa6.58□□□□□ -1.36
UBXN1-203ENST00000436354 ROMO1P60602 79 aa6.56□□□□□ -1.36
UBXN1-203ENST00000436354 MT1MQ8N339 61 aa6.55□□□□□ -1.36
UBXN1-203ENST00000436354 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
UBXN1-203ENST00000436354 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
UBXN1-203ENST00000436354 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
UBXN1-203ENST00000436354 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
UBXN1-203ENST00000436354 MT1LQ93083 61 aa6.46□□□□□ -1.38
UBXN1-203ENST00000436354 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
UBXN1-203ENST00000436354 KRTAP5-7Q6L8G8 165 aa6.45□□□□□ -1.38
UBXN1-203ENST00000436354 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
UBXN1-203ENST00000436354 KRTAP5-3Q6L8H2 238 aa6.38□□□□□ -1.39
UBXN1-203ENST00000436354 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
UBXN1-203ENST00000436354 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
UBXN1-203ENST00000436354 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
UBXN1-203ENST00000436354 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
UBXN1-203ENST00000436354 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
UBXN1-203ENST00000436354 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
UBXN1-203ENST00000436354 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
UBXN1-203ENST00000436354 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
UBXN1-203ENST00000436354 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
UBXN1-203ENST00000436354 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
UBXN1-203ENST00000436354 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
UBXN1-203ENST00000436354 KTN1-AS1Q86SY8 53 aa5.88□□□□□ -1.47
UBXN1-203ENST00000436354 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
UBXN1-203ENST00000436354 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
UBXN1-203ENST00000436354 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
UBXN1-203ENST00000436354 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
UBXN1-203ENST00000436354 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
UBXN1-203ENST00000436354 KRTAP5-8O75690 187 aa5.59□□□□□ -1.51
UBXN1-203ENST00000436354 MUC5ACP98088 5654 aa5.55□□□□□ -1.52
UBXN1-203ENST00000436354 AHNAKQ09666 5890 aaKnown RBP5.54□□□□□ -1.52
UBXN1-203ENST00000436354 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
UBXN1-203ENST00000436354 MT1AP04731 61 aa5.49□□□□□ -1.53
UBXN1-203ENST00000436354 KRTAP6-1Q3LI64 71 aa5.49□□□□□ -1.53
UBXN1-203ENST00000436354 MUC5BQ9HC84 5762 aaPredicted RBP5.45□□□□□ -1.54
UBXN1-203ENST00000436354 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
UBXN1-203ENST00000436354 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
UBXN1-203ENST00000436354 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
UBXN1-203ENST00000436354 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
UBXN1-203ENST00000436354 H3BS24 57 aa5.3□□□□□ -1.56
UBXN1-203ENST00000436354 KRTAP5-1Q6L8H4 278 aa5.14□□□□□ -1.59
UBXN1-203ENST00000436354 MT3P25713 68 aa5.06□□□□□ -1.6
UBXN1-203ENST00000436354 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
UBXN1-203ENST00000436354 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
UBXN1-203ENST00000436354 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
UBXN1-203ENST00000436354 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
UBXN1-203ENST00000436354 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
UBXN1-203ENST00000436354 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
UBXN1-203ENST00000436354 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
UBXN1-203ENST00000436354 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
UBXN1-203ENST00000436354 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
UBXN1-203ENST00000436354 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
UBXN1-203ENST00000436354 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
UBXN1-203ENST00000436354 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
UBXN1-203ENST00000436354 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
UBXN1-203ENST00000436354 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
UBXN1-203ENST00000436354 INE1O15225 51 aa3.69□□□□□ -1.82
UBXN1-203ENST00000436354 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
UBXN1-203ENST00000436354 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
UBXN1-203ENST00000436354 PRM1P04553 51 aa3.38□□□□□ -1.87
UBXN1-203ENST00000436354 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
UBXN1-203ENST00000436354 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
UBXN1-203ENST00000436354 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 68.6 ms