RNA–Protein interactions for RNA: ENST00000435564.5

PDE1A-205, Transcript of phosphodiesterase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE1A, Length 4,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-205ENST00000435564 DNAH10Q8IVF4 4471 aa1.42□□□□□ -2.18
PDE1A-205ENST00000435564 LCE3EQ5T5B0 92 aa1.42□□□□□ -2.18
PDE1A-205ENST00000435564 FAT2Q9NYQ8 4349 aa1.42□□□□□ -2.18
PDE1A-205ENST00000435564 DYNC1H1Q14204 4646 aaKnown RBP1.42□□□□□ -2.18
PDE1A-205ENST00000435564 CMYA5Q8N3K9 4069 aa1.41□□□□□ -2.18
PDE1A-205ENST00000435564 DCHS2Q6V1P9 2916 aa1.41□□□□□ -2.18
PDE1A-205ENST00000435564 CRYBG3Q68DQ2 2970 aa1.41□□□□□ -2.18
PDE1A-205ENST00000435564 FAT1Q14517 4588 aa1.4□□□□□ -2.19
PDE1A-205ENST00000435564 LCE3DQ9BYE3 92 aa1.4□□□□□ -2.19
PDE1A-205ENST00000435564 KRTAP19-5Q3LI72 72 aa1.38□□□□□ -2.19
PDE1A-205ENST00000435564 KRTAP5-4Q6L8H1 288 aa1.38□□□□□ -2.19
PDE1A-205ENST00000435564 RNF213Q63HN8 5207 aa1.37□□□□□ -2.19
PDE1A-205ENST00000435564 LCE5AQ5TCM9 118 aa1.37□□□□□ -2.19
PDE1A-205ENST00000435564 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
PDE1A-205ENST00000435564 SACSQ9NZJ4 4579 aa1.37□□□□□ -2.19
PDE1A-205ENST00000435564 HSPG2P98160 4391 aa1.36□□□□□ -2.19
PDE1A-205ENST00000435564 VPS13BQ7Z7G8 4022 aa1.36□□□□□ -2.19
PDE1A-205ENST00000435564 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
PDE1A-205ENST00000435564 PKHD1P08F94 4074 aa1.35□□□□□ -2.19
PDE1A-205ENST00000435564 USH2AO75445 5202 aa1.35□□□□□ -2.19
PDE1A-205ENST00000435564 TACC2O95359 2948 aa1.34□□□□□ -2.19
PDE1A-205ENST00000435564 HECTD4Q9Y4D8 3996 aa1.34□□□□□ -2.19
PDE1A-205ENST00000435564 SPRR2FQ96RM1 72 aa1.33□□□□□ -2.2
PDE1A-205ENST00000435564 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
PDE1A-205ENST00000435564 SRRM2Q9UQ35 2752 aaKnown RBP1.32□□□□□ -2.2
PDE1A-205ENST00000435564 KRTAP19-8Q3LI54 63 aa1.32□□□□□ -2.2
PDE1A-205ENST00000435564 DNAH8Q96JB1 4490 aa1.31□□□□□ -2.2
PDE1A-205ENST00000435564 MT1GP13640 62 aa1.31□□□□□ -2.2
PDE1A-205ENST00000435564 MT1HP80294 61 aa1.31□□□□□ -2.2
PDE1A-205ENST00000435564 APOBP04114 4563 aaKnown RBP1.3□□□□□ -2.2
PDE1A-205ENST00000435564 MT2AP02795 61 aa1.3□□□□□ -2.2
PDE1A-205ENST00000435564 DNAH5Q8TE73 4624 aa1.28□□□□□ -2.2
PDE1A-205ENST00000435564 OBSCNQ5VST9 7968 aa1.28□□□□□ -2.2
PDE1A-205ENST00000435564 MT1LQ93083 61 aa1.28□□□□□ -2.21
PDE1A-205ENST00000435564 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
PDE1A-205ENST00000435564 PRM1P04553 51 aa1.26□□□□□ -2.21
PDE1A-205ENST00000435564 TNXBP22105 4242 aa1.26□□□□□ -2.21
PDE1A-205ENST00000435564 FRAS1Q86XX4 4008 aa1.26□□□□□ -2.21
PDE1A-205ENST00000435564 MT1FP04733 61 aa1.25□□□□□ -2.21
PDE1A-205ENST00000435564 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
PDE1A-205ENST00000435564 MUC17Q685J3 4493 aa1.24□□□□□ -2.21
PDE1A-205ENST00000435564 LRP1Q07954 4544 aaKnown RBP1.23□□□□□ -2.21
PDE1A-205ENST00000435564 PKD1P98161 4303 aa1.23□□□□□ -2.21
PDE1A-205ENST00000435564 MT1EP04732 61 aa1.22□□□□□ -2.21
PDE1A-205ENST00000435564 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
PDE1A-205ENST00000435564 MT1XP80297 61 aa1.19□□□□□ -2.22
PDE1A-205ENST00000435564 KRTAP4-1Q9BYQ7 146 aa1.19□□□□□ -2.22
PDE1A-205ENST00000435564 MT4P47944 62 aa1.18□□□□□ -2.22
PDE1A-205ENST00000435564 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
PDE1A-205ENST00000435564 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
PDE1A-205ENST00000435564 KRTAP5-5Q701N2 237 aaPredicted RBP1.18□□□□□ -2.22
PDE1A-205ENST00000435564 MT1AP04731 61 aa1.17□□□□□ -2.22
PDE1A-205ENST00000435564 KRTAP9-3Q9BYQ3 159 aa1.17□□□□□ -2.22
PDE1A-205ENST00000435564 DSTQ03001 7570 aaKnown RBP1.15□□□□□ -2.23
PDE1A-205ENST00000435564 KRTAP5-8O75690 187 aa1.15□□□□□ -2.23
PDE1A-205ENST00000435564 MT1BP07438 61 aa1.14□□□□□ -2.23
PDE1A-205ENST00000435564 KRTAP19-2Q3LHN2 52 aa1.13□□□□□ -2.23
PDE1A-205ENST00000435564 MT1MQ8N339 61 aa1.13□□□□□ -2.23
PDE1A-205ENST00000435564 LCE1BQ5T7P3 118 aa1.08□□□□□ -2.24
PDE1A-205ENST00000435564 KRTAP9-6A8MVA2 160 aa1.07□□□□□ -2.24
PDE1A-205ENST00000435564 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
PDE1A-205ENST00000435564 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
PDE1A-205ENST00000435564 FLGP20930 4061 aaPredicted RBP1.04□□□□□ -2.24
PDE1A-205ENST00000435564 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
PDE1A-205ENST00000435564 LCE1FQ5T754 118 aa1□□□□□ -2.25
PDE1A-205ENST00000435564 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
PDE1A-205ENST00000435564 LPAP08519 4548 aa0.99□□□□□ -2.25
PDE1A-205ENST00000435564 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
PDE1A-205ENST00000435564 LCE1CQ5T751 118 aa0.96□□□□□ -2.26
PDE1A-205ENST00000435564 LCE1EQ5T753 118 aa0.96□□□□□ -2.26
PDE1A-205ENST00000435564 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
PDE1A-205ENST00000435564 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.26
PDE1A-205ENST00000435564 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.27
PDE1A-205ENST00000435564 KRTAP4-3Q9BYR4 195 aa0.88□□□□□ -2.27
PDE1A-205ENST00000435564 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
PDE1A-205ENST00000435564 MUC19Q7Z5P9 8384 aa0.76□□□□□ -2.29
PDE1A-205ENST00000435564 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 48.7 ms