RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 H3BNG1 76 aa1.44□□□□□ -2.18
PTPN12-206ENST00000435495 DMBT1Q9UGM3 2413 aaPredicted RBP1.44□□□□□ -2.18
PTPN12-206ENST00000435495 HTN1P15515 57 aa1.44□□□□□ -2.18
PTPN12-206ENST00000435495 NOP10Q9NPE3 64 aaKnown RBP1.44□□□□□ -2.18
PTPN12-206ENST00000435495 HMCN2Q8NDA2 5059 aa1.43□□□□□ -2.18
PTPN12-206ENST00000435495 DNAH8Q96JB1 4490 aa1.42□□□□□ -2.18
PTPN12-206ENST00000435495 A0A096LPF7 62 aa1.42□□□□□ -2.18
PTPN12-206ENST00000435495 SMR3BP02814 79 aaPredicted RBP1.42□□□□□ -2.18
PTPN12-206ENST00000435495 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
PTPN12-206ENST00000435495 FAT3Q8TDW7 4589 aa1.4□□□□□ -2.19
PTPN12-206ENST00000435495 LINC01556Q5JQF7 62 aa1.39□□□□□ -2.19
PTPN12-206ENST00000435495 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
PTPN12-206ENST00000435495 RNF213Q63HN8 5207 aa1.39□□□□□ -2.19
PTPN12-206ENST00000435495 PKHD1L1Q86WI1 4243 aa1.38□□□□□ -2.19
PTPN12-206ENST00000435495 FSIP2Q5CZC0 6907 aa1.37□□□□□ -2.19
PTPN12-206ENST00000435495 LRP2P98164 4655 aa1.36□□□□□ -2.19
PTPN12-206ENST00000435495 TNXBP22105 4242 aa1.35□□□□□ -2.19
PTPN12-206ENST00000435495 FAT4Q6V0I7 4981 aa1.34□□□□□ -2.19
PTPN12-206ENST00000435495 MT1HL1P0DM35 61 aa1.34□□□□□ -2.19
PTPN12-206ENST00000435495 SPINK6Q6UWN8 80 aa1.31□□□□□ -2.2
PTPN12-206ENST00000435495 LPAP08519 4548 aa1.3□□□□□ -2.2
PTPN12-206ENST00000435495 A0A096LNI7 61 aa1.29□□□□□ -2.2
PTPN12-206ENST00000435495 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
PTPN12-206ENST00000435495 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
PTPN12-206ENST00000435495 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
PTPN12-206ENST00000435495 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
PTPN12-206ENST00000435495 M0QZ58 72 aa1.25□□□□□ -2.21
PTPN12-206ENST00000435495 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
PTPN12-206ENST00000435495 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
PTPN12-206ENST00000435495 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
PTPN12-206ENST00000435495 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
PTPN12-206ENST00000435495 MUC17Q685J3 4493 aa1.24□□□□□ -2.21
PTPN12-206ENST00000435495 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
PTPN12-206ENST00000435495 M0R2T5 61 aa1.21□□□□□ -2.22
PTPN12-206ENST00000435495 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
PTPN12-206ENST00000435495 KRTAP4-1Q9BYQ7 146 aa1.17□□□□□ -2.22
PTPN12-206ENST00000435495 KMT2DO14686 5537 aa1.16□□□□□ -2.22
PTPN12-206ENST00000435495 RPS29P62273 56 aaKnown RBP1.16□□□□□ -2.22
PTPN12-206ENST00000435495 MT1HP80294 61 aa1.15□□□□□ -2.23
PTPN12-206ENST00000435495 KRTAP19-2Q3LHN2 52 aa1.14□□□□□ -2.23
PTPN12-206ENST00000435495 USH2AO75445 5202 aa1.14□□□□□ -2.23
PTPN12-206ENST00000435495 TNP1P09430 55 aa1.13□□□□□ -2.23
PTPN12-206ENST00000435495 PRM1P04553 51 aa1.13□□□□□ -2.23
PTPN12-206ENST00000435495 FLGP20930 4061 aaPredicted RBP1.12□□□□□ -2.23
PTPN12-206ENST00000435495 C9orf92A6NGG3 77 aa1.12□□□□□ -2.23
PTPN12-206ENST00000435495 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
PTPN12-206ENST00000435495 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
PTPN12-206ENST00000435495 MT2AP02795 61 aa1.06□□□□□ -2.24
PTPN12-206ENST00000435495 MT1FP04733 61 aa1.04□□□□□ -2.24
PTPN12-206ENST00000435495 KRTAP19-6Q3LI70 58 aa1.04□□□□□ -2.24
PTPN12-206ENST00000435495 MUC12Q9UKN1 5478 aa1.02□□□□□ -2.25
PTPN12-206ENST00000435495 KRTAP8-1Q8IUC2 63 aa0.95□□□□□ -2.26
PTPN12-206ENST00000435495 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
PTPN12-206ENST00000435495 MT1BP07438 61 aa0.94□□□□□ -2.26
PTPN12-206ENST00000435495 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
PTPN12-206ENST00000435495 KRTAP19-8Q3LI54 63 aa0.93□□□□□ -2.26
PTPN12-206ENST00000435495 SPRR2GQ9BYE4 73 aa0.93□□□□□ -2.26
PTPN12-206ENST00000435495 SPRR2EP22531 72 aa0.91□□□□□ -2.26
PTPN12-206ENST00000435495 SPRR2BP35325 72 aa0.91□□□□□ -2.26
PTPN12-206ENST00000435495 SPRR2AP35326 72 aa0.91□□□□□ -2.26
PTPN12-206ENST00000435495 SPRR2FQ96RM1 72 aa0.91□□□□□ -2.26
PTPN12-206ENST00000435495 SPRR2DP22532 72 aa0.88□□□□□ -2.27
PTPN12-206ENST00000435495 MT1XP80297 61 aa0.87□□□□□ -2.27
PTPN12-206ENST00000435495 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
PTPN12-206ENST00000435495 KRTAP6-2Q3LI66 62 aa0.83□□□□□ -2.28
PTPN12-206ENST00000435495 MT1AP04731 61 aa0.81□□□□□ -2.28
PTPN12-206ENST00000435495 KRTAP19-5Q3LI72 72 aa0.8□□□□□ -2.28
PTPN12-206ENST00000435495 MT1EP04732 61 aa0.78□□□□□ -2.28
PTPN12-206ENST00000435495 KRTAP19-7Q3SYF9 63 aa0.78□□□□□ -2.28
PTPN12-206ENST00000435495 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
PTPN12-206ENST00000435495 MT4P47944 62 aa0.77□□□□□ -2.29
PTPN12-206ENST00000435495 MT1GP13640 62 aa0.76□□□□□ -2.29
PTPN12-206ENST00000435495 MT1MQ8N339 61 aa0.74□□□□□ -2.29
PTPN12-206ENST00000435495 MT1LQ93083 61 aa0.73□□□□□ -2.29
PTPN12-206ENST00000435495 KRTAP20-2Q3LI61 65 aa0.71□□□□□ -2.3
PTPN12-206ENST00000435495 KRTAP6-1Q3LI64 71 aa0.62□□□□□ -2.31
PTPN12-206ENST00000435495 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms