RNA–Protein interactions for RNA: ENST00000435165.2

SGIP1-206, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SGIP1, Length 3,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-206ENST00000435165 KRTAP10-10P60014 251 aa1.57□□□□□ -2.16
SGIP1-206ENST00000435165 KRTAP4-1Q9BYQ7 146 aa1.56□□□□□ -2.16
SGIP1-206ENST00000435165 LCE1AQ5T7P2 110 aa1.55□□□□□ -2.16
SGIP1-206ENST00000435165 USH2AO75445 5202 aa1.54□□□□□ -2.16
SGIP1-206ENST00000435165 FLGP20930 4061 aaPredicted RBP1.52□□□□□ -2.17
SGIP1-206ENST00000435165 LPAP08519 4548 aa1.52□□□□□ -2.17
SGIP1-206ENST00000435165 LCE1EQ5T753 118 aa1.52□□□□□ -2.17
SGIP1-206ENST00000435165 M0R2T5 61 aa1.5□□□□□ -2.17
SGIP1-206ENST00000435165 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
SGIP1-206ENST00000435165 LCE3CQ5T5A8 94 aa1.49□□□□□ -2.17
SGIP1-206ENST00000435165 MT2AP02795 61 aa1.49□□□□□ -2.17
SGIP1-206ENST00000435165 M0QZ58 72 aa1.47□□□□□ -2.17
SGIP1-206ENST00000435165 KRTAP5-4Q6L8H1 288 aa1.47□□□□□ -2.17
SGIP1-206ENST00000435165 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
SGIP1-206ENST00000435165 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
SGIP1-206ENST00000435165 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
SGIP1-206ENST00000435165 MT3P25713 68 aa1.44□□□□□ -2.18
SGIP1-206ENST00000435165 MT1FP04733 61 aa1.44□□□□□ -2.18
SGIP1-206ENST00000435165 MACF1Q9UPN3 7388 aaKnown RBP1.41□□□□□ -2.18
SGIP1-206ENST00000435165 KRTAP10-7P60409 375 aaPredicted RBP1.41□□□□□ -2.18
SGIP1-206ENST00000435165 LCE3EQ5T5B0 92 aa1.41□□□□□ -2.18
SGIP1-206ENST00000435165 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.19
SGIP1-206ENST00000435165 KRTAP10-5P60370 271 aa1.4□□□□□ -2.19
SGIP1-206ENST00000435165 KRTAP19-8Q3LI54 63 aa1.4□□□□□ -2.19
SGIP1-206ENST00000435165 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
SGIP1-206ENST00000435165 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
SGIP1-206ENST00000435165 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
SGIP1-206ENST00000435165 DSTQ03001 7570 aaKnown RBP1.36□□□□□ -2.19
SGIP1-206ENST00000435165 KRTAP5-1Q6L8H4 278 aa1.36□□□□□ -2.19
SGIP1-206ENST00000435165 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
SGIP1-206ENST00000435165 KRTAP10-12P60413 245 aa1.35□□□□□ -2.19
SGIP1-206ENST00000435165 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
SGIP1-206ENST00000435165 SPRR2GQ9BYE4 73 aa1.34□□□□□ -2.2
SGIP1-206ENST00000435165 SPRR2EP22531 72 aa1.33□□□□□ -2.2
SGIP1-206ENST00000435165 SPRR2BP35325 72 aa1.33□□□□□ -2.2
SGIP1-206ENST00000435165 SPRR2AP35326 72 aa1.33□□□□□ -2.2
SGIP1-206ENST00000435165 KMT2DO14686 5537 aa1.32□□□□□ -2.2
SGIP1-206ENST00000435165 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
SGIP1-206ENST00000435165 SPRR2DP22532 72 aa1.32□□□□□ -2.2
SGIP1-206ENST00000435165 C9orf92A6NGG3 77 aa1.31□□□□□ -2.2
SGIP1-206ENST00000435165 MT1BP07438 61 aa1.3□□□□□ -2.2
SGIP1-206ENST00000435165 LCE3DQ9BYE3 92 aa1.3□□□□□ -2.2
SGIP1-206ENST00000435165 TNP1P09430 55 aa1.3□□□□□ -2.2
SGIP1-206ENST00000435165 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
SGIP1-206ENST00000435165 SPRR2FQ96RM1 72 aa1.25□□□□□ -2.21
SGIP1-206ENST00000435165 KRTAP8-1Q8IUC2 63 aa1.25□□□□□ -2.21
SGIP1-206ENST00000435165 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
SGIP1-206ENST00000435165 KRTAP5-5Q701N2 237 aaPredicted RBP1.24□□□□□ -2.21
SGIP1-206ENST00000435165 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
SGIP1-206ENST00000435165 KRTAP12-3P60328 96 aa1.22□□□□□ -2.21
SGIP1-206ENST00000435165 MUC12Q9UKN1 5478 aa1.18□□□□□ -2.22
SGIP1-206ENST00000435165 KRTAP4-3Q9BYR4 195 aa1.17□□□□□ -2.22
SGIP1-206ENST00000435165 MT1XP80297 61 aa1.16□□□□□ -2.22
SGIP1-206ENST00000435165 LCE3AQ5TA76 89 aa1.15□□□□□ -2.23
SGIP1-206ENST00000435165 KRTAP19-3Q7Z4W3 81 aa1.13□□□□□ -2.23
SGIP1-206ENST00000435165 MT1GP13640 62 aa1.12□□□□□ -2.23
SGIP1-206ENST00000435165 PRM1P04553 51 aa1.11□□□□□ -2.23
SGIP1-206ENST00000435165 MT1EP04732 61 aa1.08□□□□□ -2.24
SGIP1-206ENST00000435165 KRTAP9-6A8MVA2 160 aa1.07□□□□□ -2.24
SGIP1-206ENST00000435165 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
SGIP1-206ENST00000435165 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
SGIP1-206ENST00000435165 KRTAP19-7Q3SYF9 63 aa1.04□□□□□ -2.24
SGIP1-206ENST00000435165 MUC19Q7Z5P9 8384 aa1.04□□□□□ -2.24
SGIP1-206ENST00000435165 KRTAP19-5Q3LI72 72 aa1.04□□□□□ -2.24
SGIP1-206ENST00000435165 MT1MQ8N339 61 aa1.03□□□□□ -2.24
SGIP1-206ENST00000435165 MT4P47944 62 aa1.03□□□□□ -2.24
SGIP1-206ENST00000435165 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
SGIP1-206ENST00000435165 LCE1CQ5T751 118 aa0.98□□□□□ -2.25
SGIP1-206ENST00000435165 LCE1BQ5T7P3 118 aa0.98□□□□□ -2.25
SGIP1-206ENST00000435165 MT1LQ93083 61 aa0.98□□□□□ -2.25
SGIP1-206ENST00000435165 MT1AP04731 61 aa0.95□□□□□ -2.26
SGIP1-206ENST00000435165 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
SGIP1-206ENST00000435165 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.28
SGIP1-206ENST00000435165 KRTAP6-1Q3LI64 71 aa0.77□□□□□ -2.29
SGIP1-206ENST00000435165 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
SGIP1-206ENST00000435165 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
SGIP1-206ENST00000435165 KRTAP21-2Q3LI59 83 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 85.9 ms