RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
COL17A1-204ENST00000433822 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
COL17A1-204ENST00000433822 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
COL17A1-204ENST00000433822 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
COL17A1-204ENST00000433822 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
COL17A1-204ENST00000433822 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
COL17A1-204ENST00000433822 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
COL17A1-204ENST00000433822 MT1HP80294 61 aa3.29□□□□□ -1.88
COL17A1-204ENST00000433822 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
COL17A1-204ENST00000433822 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
COL17A1-204ENST00000433822 NEBP20929 6669 aa3.25□□□□□ -1.89
COL17A1-204ENST00000433822 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
COL17A1-204ENST00000433822 TNP1P09430 55 aa3.2□□□□□ -1.9
COL17A1-204ENST00000433822 PLAC4Q8WY50 150 aa3.17□□□□□ -1.9
COL17A1-204ENST00000433822 KRTAP19-8Q3LI54 63 aa3.15□□□□□ -1.91
COL17A1-204ENST00000433822 MT2AP02795 61 aa3.14□□□□□ -1.91
COL17A1-204ENST00000433822 M0R2T5 61 aa3.13□□□□□ -1.91
COL17A1-204ENST00000433822 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
COL17A1-204ENST00000433822 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
COL17A1-204ENST00000433822 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
COL17A1-204ENST00000433822 MT1FP04733 61 aa3.11□□□□□ -1.91
COL17A1-204ENST00000433822 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
COL17A1-204ENST00000433822 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
COL17A1-204ENST00000433822 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
COL17A1-204ENST00000433822 MT1BP07438 61 aa3.04□□□□□ -1.92
COL17A1-204ENST00000433822 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
COL17A1-204ENST00000433822 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
COL17A1-204ENST00000433822 KMT2DO14686 5537 aa3.01□□□□□ -1.93
COL17A1-204ENST00000433822 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
COL17A1-204ENST00000433822 MT1XP80297 61 aa2.99□□□□□ -1.93
COL17A1-204ENST00000433822 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
COL17A1-204ENST00000433822 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
COL17A1-204ENST00000433822 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
COL17A1-204ENST00000433822 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
COL17A1-204ENST00000433822 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
COL17A1-204ENST00000433822 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
COL17A1-204ENST00000433822 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
COL17A1-204ENST00000433822 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
COL17A1-204ENST00000433822 KRTAP12-3P60328 96 aa2.87□□□□□ -1.95
COL17A1-204ENST00000433822 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
COL17A1-204ENST00000433822 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
COL17A1-204ENST00000433822 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
COL17A1-204ENST00000433822 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
COL17A1-204ENST00000433822 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
COL17A1-204ENST00000433822 SPRR2EP22531 72 aa2.7□□□□□ -1.98
COL17A1-204ENST00000433822 SPRR2BP35325 72 aa2.7□□□□□ -1.98
COL17A1-204ENST00000433822 SPRR2AP35326 72 aa2.7□□□□□ -1.98
COL17A1-204ENST00000433822 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
COL17A1-204ENST00000433822 INE1O15225 51 aa2.65□□□□□ -1.99
COL17A1-204ENST00000433822 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
COL17A1-204ENST00000433822 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
COL17A1-204ENST00000433822 MT1EP04732 61 aa2.61□□□□□ -1.99
COL17A1-204ENST00000433822 SPRR2DP22532 72 aa2.6□□□□□ -1.99
COL17A1-204ENST00000433822 MT1LQ93083 61 aa2.6□□□□□ -1.99
COL17A1-204ENST00000433822 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
COL17A1-204ENST00000433822 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
COL17A1-204ENST00000433822 MT1GP13640 62 aa2.49□□□□□ -2.01
COL17A1-204ENST00000433822 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
COL17A1-204ENST00000433822 KRTAP19-3Q7Z4W3 81 aa2.47□□□□□ -2.01
COL17A1-204ENST00000433822 MT1MQ8N339 61 aa2.44□□□□□ -2.02
COL17A1-204ENST00000433822 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
COL17A1-204ENST00000433822 MT4P47944 62 aa2.36□□□□□ -2.03
COL17A1-204ENST00000433822 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
COL17A1-204ENST00000433822 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
COL17A1-204ENST00000433822 MT1AP04731 61 aa2.24□□□□□ -2.05
COL17A1-204ENST00000433822 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
COL17A1-204ENST00000433822 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
COL17A1-204ENST00000433822 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
COL17A1-204ENST00000433822 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
COL17A1-204ENST00000433822 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
COL17A1-204ENST00000433822 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
COL17A1-204ENST00000433822 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
COL17A1-204ENST00000433822 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
COL17A1-204ENST00000433822 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
COL17A1-204ENST00000433822 PRM1P04553 51 aa1.86□□□□□ -2.11
COL17A1-204ENST00000433822 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
COL17A1-204ENST00000433822 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
COL17A1-204ENST00000433822 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 77.2 ms