RNA–Protein interactions for RNA: ENST00000433066.1

SMPD4P1-202, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 3

Gene SMPD4P1, Length 483 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-202ENST00000433066 KRTAP10-7P60409 375 aaPredicted RBP2.88□□□□□ -1.95
SMPD4P1-202ENST00000433066 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
SMPD4P1-202ENST00000433066 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
SMPD4P1-202ENST00000433066 LINC01558Q9Y6Z2 57 aa2.88□□□□□ -1.95
SMPD4P1-202ENST00000433066 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
SMPD4P1-202ENST00000433066 A0A0D9SG42 100 aa2.86□□□□□ -1.95
SMPD4P1-202ENST00000433066 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
SMPD4P1-202ENST00000433066 SMIM26A0A096LP01 95 aa2.85□□□□□ -1.95
SMPD4P1-202ENST00000433066 V9GYY9 64 aa2.85□□□□□ -1.95
SMPD4P1-202ENST00000433066 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
SMPD4P1-202ENST00000433066 CAMK2N1Q7Z7J9 78 aa2.83□□□□□ -1.96
SMPD4P1-202ENST00000433066 MT4P47944 62 aa2.82□□□□□ -1.96
SMPD4P1-202ENST00000433066 RPS28P62857 69 aaKnown RBP2.82□□□□□ -1.96
SMPD4P1-202ENST00000433066 UQCR11O14957 56 aa2.81□□□□□ -1.96
SMPD4P1-202ENST00000433066 Q1T7F1 81 aa2.8□□□□□ -1.96
SMPD4P1-202ENST00000433066 PSPHP1O15172 72 aa2.78□□□□□ -1.96
SMPD4P1-202ENST00000433066 A8MU10 97 aa2.77□□□□□ -1.97
SMPD4P1-202ENST00000433066 KRTAP12-1P59990 96 aa2.76□□□□□ -1.97
SMPD4P1-202ENST00000433066 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
SMPD4P1-202ENST00000433066 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
SMPD4P1-202ENST00000433066 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
SMPD4P1-202ENST00000433066 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
SMPD4P1-202ENST00000433066 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
SMPD4P1-202ENST00000433066 K7ERS5 55 aa2.72□□□□□ -1.97
SMPD4P1-202ENST00000433066 A6NED7 52 aa2.71□□□□□ -1.98
SMPD4P1-202ENST00000433066 MT1EP04732 61 aa2.71□□□□□ -1.98
SMPD4P1-202ENST00000433066 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
SMPD4P1-202ENST00000433066 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
SMPD4P1-202ENST00000433066 TNP1P09430 55 aa2.64□□□□□ -1.99
SMPD4P1-202ENST00000433066 C10orf95Q9H7T3 257 aa2.63□□□□□ -1.99
SMPD4P1-202ENST00000433066 PRO0628Q9UI54 55 aa2.63□□□□□ -1.99
SMPD4P1-202ENST00000433066 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
SMPD4P1-202ENST00000433066 MT1GP13640 62 aa2.62□□□□□ -1.99
SMPD4P1-202ENST00000433066 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
SMPD4P1-202ENST00000433066 MT1MQ8N339 61 aa2.6□□□□□ -1.99
SMPD4P1-202ENST00000433066 CDC42SE1Q9NRR8 79 aa2.6□□□□□ -1.99
SMPD4P1-202ENST00000433066 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
SMPD4P1-202ENST00000433066 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
SMPD4P1-202ENST00000433066 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
SMPD4P1-202ENST00000433066 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
SMPD4P1-202ENST00000433066 PP632Q6XCG6 107 aa2.56□□□□□ -2
SMPD4P1-202ENST00000433066 MT3P25713 68 aa2.55□□□□□ -2
SMPD4P1-202ENST00000433066 KRTAP25-1Q3LHN0 102 aa2.55□□□□□ -2
SMPD4P1-202ENST00000433066 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
SMPD4P1-202ENST00000433066 MT1LQ93083 61 aa2.53□□□□□ -2
SMPD4P1-202ENST00000433066 ROMO1P60602 79 aa2.52□□□□□ -2.01
SMPD4P1-202ENST00000433066 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
SMPD4P1-202ENST00000433066 BRK1Q8WUW1 75 aa2.5□□□□□ -2.01
SMPD4P1-202ENST00000433066 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
SMPD4P1-202ENST00000433066 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
SMPD4P1-202ENST00000433066 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
SMPD4P1-202ENST00000433066 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
SMPD4P1-202ENST00000433066 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
SMPD4P1-202ENST00000433066 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
SMPD4P1-202ENST00000433066 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
SMPD4P1-202ENST00000433066 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
SMPD4P1-202ENST00000433066 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
SMPD4P1-202ENST00000433066 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
SMPD4P1-202ENST00000433066 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
SMPD4P1-202ENST00000433066 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
SMPD4P1-202ENST00000433066 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
SMPD4P1-202ENST00000433066 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
SMPD4P1-202ENST00000433066 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
SMPD4P1-202ENST00000433066 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
SMPD4P1-202ENST00000433066 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
SMPD4P1-202ENST00000433066 MT1AP04731 61 aa2.13□□□□□ -2.07
SMPD4P1-202ENST00000433066 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
SMPD4P1-202ENST00000433066 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
SMPD4P1-202ENST00000433066 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
SMPD4P1-202ENST00000433066 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
SMPD4P1-202ENST00000433066 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SMPD4P1-202ENST00000433066 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
SMPD4P1-202ENST00000433066 INE1O15225 51 aa1.65□□□□□ -2.15
SMPD4P1-202ENST00000433066 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
SMPD4P1-202ENST00000433066 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
SMPD4P1-202ENST00000433066 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
SMPD4P1-202ENST00000433066 PRM1P04553 51 aa1.28□□□□□ -2.2
SMPD4P1-202ENST00000433066 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 256.1 ms