RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
SF1-208ENST00000432725 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
SF1-208ENST00000432725 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
SF1-208ENST00000432725 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
SF1-208ENST00000432725 SPRR2DP22532 72 aa6.04□□□□□ -1.44
SF1-208ENST00000432725 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
SF1-208ENST00000432725 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
SF1-208ENST00000432725 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
SF1-208ENST00000432725 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
SF1-208ENST00000432725 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
SF1-208ENST00000432725 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
SF1-208ENST00000432725 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
SF1-208ENST00000432725 MT1EP04732 61 aa5.75□□□□□ -1.49
SF1-208ENST00000432725 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
SF1-208ENST00000432725 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
SF1-208ENST00000432725 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
SF1-208ENST00000432725 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.5
SF1-208ENST00000432725 MT1GP13640 62 aa5.58□□□□□ -1.52
SF1-208ENST00000432725 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
SF1-208ENST00000432725 MT1LQ93083 61 aa5.52□□□□□ -1.53
SF1-208ENST00000432725 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
SF1-208ENST00000432725 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
SF1-208ENST00000432725 GPR98Q8WXG9 6306 aa5.48□□□□□ -1.53
SF1-208ENST00000432725 MT1MQ8N339 61 aa5.47□□□□□ -1.53
SF1-208ENST00000432725 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
SF1-208ENST00000432725 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
SF1-208ENST00000432725 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
SF1-208ENST00000432725 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
SF1-208ENST00000432725 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
SF1-208ENST00000432725 MT4P47944 62 aa5.28□□□□□ -1.56
SF1-208ENST00000432725 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
SF1-208ENST00000432725 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
SF1-208ENST00000432725 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
SF1-208ENST00000432725 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
SF1-208ENST00000432725 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
SF1-208ENST00000432725 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
SF1-208ENST00000432725 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
SF1-208ENST00000432725 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
SF1-208ENST00000432725 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
SF1-208ENST00000432725 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
SF1-208ENST00000432725 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
SF1-208ENST00000432725 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
SF1-208ENST00000432725 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
SF1-208ENST00000432725 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
SF1-208ENST00000432725 MT1AP04731 61 aa4.74□□□□□ -1.65
SF1-208ENST00000432725 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
SF1-208ENST00000432725 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
SF1-208ENST00000432725 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
SF1-208ENST00000432725 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
SF1-208ENST00000432725 H3BS24 57 aa4.54□□□□□ -1.68
SF1-208ENST00000432725 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
SF1-208ENST00000432725 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
SF1-208ENST00000432725 INE1O15225 51 aa4.43□□□□□ -1.7
SF1-208ENST00000432725 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
SF1-208ENST00000432725 MT3P25713 68 aa4.32□□□□□ -1.72
SF1-208ENST00000432725 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
SF1-208ENST00000432725 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
SF1-208ENST00000432725 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
SF1-208ENST00000432725 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
SF1-208ENST00000432725 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
SF1-208ENST00000432725 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
SF1-208ENST00000432725 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
SF1-208ENST00000432725 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
SF1-208ENST00000432725 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SF1-208ENST00000432725 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
SF1-208ENST00000432725 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
SF1-208ENST00000432725 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
SF1-208ENST00000432725 PRM1P04553 51 aa3.46□□□□□ -1.86
SF1-208ENST00000432725 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
SF1-208ENST00000432725 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
SF1-208ENST00000432725 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
SF1-208ENST00000432725 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SF1-208ENST00000432725 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
SF1-208ENST00000432725 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
SF1-208ENST00000432725 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SF1-208ENST00000432725 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
SF1-208ENST00000432725 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SF1-208ENST00000432725 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms