RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
VTI1A-202ENST00000432306 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
VTI1A-202ENST00000432306 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
VTI1A-202ENST00000432306 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
VTI1A-202ENST00000432306 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
VTI1A-202ENST00000432306 SPRR2GQ9BYE4 73 aa3.33□□□□□ -1.88
VTI1A-202ENST00000432306 MT2AP02795 61 aa3.32□□□□□ -1.88
VTI1A-202ENST00000432306 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
VTI1A-202ENST00000432306 MT1FP04733 61 aa3.29□□□□□ -1.88
VTI1A-202ENST00000432306 KRTAP10-10P60014 251 aa3.29□□□□□ -1.88
VTI1A-202ENST00000432306 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
VTI1A-202ENST00000432306 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
VTI1A-202ENST00000432306 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
VTI1A-202ENST00000432306 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
VTI1A-202ENST00000432306 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
VTI1A-202ENST00000432306 NEBP20929 6669 aa3.21□□□□□ -1.9
VTI1A-202ENST00000432306 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
VTI1A-202ENST00000432306 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
VTI1A-202ENST00000432306 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
VTI1A-202ENST00000432306 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
VTI1A-202ENST00000432306 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.9
VTI1A-202ENST00000432306 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
VTI1A-202ENST00000432306 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
VTI1A-202ENST00000432306 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
VTI1A-202ENST00000432306 MT1XP80297 61 aa3.07□□□□□ -1.92
VTI1A-202ENST00000432306 MT1BP07438 61 aa3.05□□□□□ -1.92
VTI1A-202ENST00000432306 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
VTI1A-202ENST00000432306 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
VTI1A-202ENST00000432306 KMT2DO14686 5537 aa3□□□□□ -1.93
VTI1A-202ENST00000432306 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
VTI1A-202ENST00000432306 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
VTI1A-202ENST00000432306 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
VTI1A-202ENST00000432306 SPRR2EP22531 72 aa2.93□□□□□ -1.94
VTI1A-202ENST00000432306 SPRR2BP35325 72 aa2.93□□□□□ -1.94
VTI1A-202ENST00000432306 SPRR2AP35326 72 aa2.93□□□□□ -1.94
VTI1A-202ENST00000432306 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
VTI1A-202ENST00000432306 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
VTI1A-202ENST00000432306 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
VTI1A-202ENST00000432306 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.94
VTI1A-202ENST00000432306 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
VTI1A-202ENST00000432306 SPRR2DP22532 72 aa2.85□□□□□ -1.95
VTI1A-202ENST00000432306 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
VTI1A-202ENST00000432306 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
VTI1A-202ENST00000432306 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
VTI1A-202ENST00000432306 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
VTI1A-202ENST00000432306 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
VTI1A-202ENST00000432306 MT1LQ93083 61 aa2.68□□□□□ -1.98
VTI1A-202ENST00000432306 MT1EP04732 61 aa2.65□□□□□ -1.98
VTI1A-202ENST00000432306 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
VTI1A-202ENST00000432306 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
VTI1A-202ENST00000432306 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
VTI1A-202ENST00000432306 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
VTI1A-202ENST00000432306 MT4P47944 62 aa2.5□□□□□ -2.01
VTI1A-202ENST00000432306 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
VTI1A-202ENST00000432306 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
VTI1A-202ENST00000432306 MT1GP13640 62 aa2.46□□□□□ -2.02
VTI1A-202ENST00000432306 KRTAP19-3Q7Z4W3 81 aa2.46□□□□□ -2.02
VTI1A-202ENST00000432306 MT1MQ8N339 61 aa2.45□□□□□ -2.02
VTI1A-202ENST00000432306 MT1AP04731 61 aa2.43□□□□□ -2.02
VTI1A-202ENST00000432306 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
VTI1A-202ENST00000432306 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
VTI1A-202ENST00000432306 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
VTI1A-202ENST00000432306 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
VTI1A-202ENST00000432306 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
VTI1A-202ENST00000432306 PRM1P04553 51 aa2.22□□□□□ -2.05
VTI1A-202ENST00000432306 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
VTI1A-202ENST00000432306 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
VTI1A-202ENST00000432306 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
VTI1A-202ENST00000432306 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
VTI1A-202ENST00000432306 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
VTI1A-202ENST00000432306 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
VTI1A-202ENST00000432306 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
VTI1A-202ENST00000432306 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
VTI1A-202ENST00000432306 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
VTI1A-202ENST00000432306 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
VTI1A-202ENST00000432306 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
VTI1A-202ENST00000432306 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms