RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 K7ERS5 55 aa5.49□□□□□ -1.53
CSTF3-202ENST00000431742 TNP1P09430 55 aa5.46□□□□□ -1.54
CSTF3-202ENST00000431742 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
CSTF3-202ENST00000431742 SPRR2EP22531 72 aa5.41□□□□□ -1.54
CSTF3-202ENST00000431742 SPRR2BP35325 72 aa5.41□□□□□ -1.54
CSTF3-202ENST00000431742 SPRR2AP35326 72 aa5.41□□□□□ -1.54
CSTF3-202ENST00000431742 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
CSTF3-202ENST00000431742 LCE1AQ5T7P2 110 aa5.41□□□□□ -1.54
CSTF3-202ENST00000431742 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
CSTF3-202ENST00000431742 MT1EP04732 61 aa5.34□□□□□ -1.55
CSTF3-202ENST00000431742 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
CSTF3-202ENST00000431742 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
CSTF3-202ENST00000431742 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
CSTF3-202ENST00000431742 SPRR2DP22532 72 aa5.22□□□□□ -1.57
CSTF3-202ENST00000431742 ROMO1P60602 79 aa5.22□□□□□ -1.57
CSTF3-202ENST00000431742 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
CSTF3-202ENST00000431742 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
CSTF3-202ENST00000431742 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
CSTF3-202ENST00000431742 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
CSTF3-202ENST00000431742 MT1LQ93083 61 aa5.15□□□□□ -1.59
CSTF3-202ENST00000431742 MT1GP13640 62 aa5.12□□□□□ -1.59
CSTF3-202ENST00000431742 BRK1Q8WUW1 75 aa5.12□□□□□ -1.59
CSTF3-202ENST00000431742 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
CSTF3-202ENST00000431742 MT1MQ8N339 61 aa5.06□□□□□ -1.6
CSTF3-202ENST00000431742 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
CSTF3-202ENST00000431742 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
CSTF3-202ENST00000431742 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
CSTF3-202ENST00000431742 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
CSTF3-202ENST00000431742 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
CSTF3-202ENST00000431742 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
CSTF3-202ENST00000431742 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
CSTF3-202ENST00000431742 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
CSTF3-202ENST00000431742 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
CSTF3-202ENST00000431742 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
CSTF3-202ENST00000431742 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
CSTF3-202ENST00000431742 MT3P25713 68 aa4.55□□□□□ -1.68
CSTF3-202ENST00000431742 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
CSTF3-202ENST00000431742 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
CSTF3-202ENST00000431742 MT4P47944 62 aa4.53□□□□□ -1.68
CSTF3-202ENST00000431742 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
CSTF3-202ENST00000431742 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
CSTF3-202ENST00000431742 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
CSTF3-202ENST00000431742 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
CSTF3-202ENST00000431742 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
CSTF3-202ENST00000431742 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
CSTF3-202ENST00000431742 MT1AP04731 61 aa4.39□□□□□ -1.71
CSTF3-202ENST00000431742 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
CSTF3-202ENST00000431742 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
CSTF3-202ENST00000431742 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
CSTF3-202ENST00000431742 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
CSTF3-202ENST00000431742 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
CSTF3-202ENST00000431742 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
CSTF3-202ENST00000431742 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
CSTF3-202ENST00000431742 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
CSTF3-202ENST00000431742 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
CSTF3-202ENST00000431742 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
CSTF3-202ENST00000431742 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
CSTF3-202ENST00000431742 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
CSTF3-202ENST00000431742 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
CSTF3-202ENST00000431742 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CSTF3-202ENST00000431742 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
CSTF3-202ENST00000431742 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
CSTF3-202ENST00000431742 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
CSTF3-202ENST00000431742 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
CSTF3-202ENST00000431742 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
CSTF3-202ENST00000431742 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
CSTF3-202ENST00000431742 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
CSTF3-202ENST00000431742 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
CSTF3-202ENST00000431742 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
CSTF3-202ENST00000431742 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
CSTF3-202ENST00000431742 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CSTF3-202ENST00000431742 INE1O15225 51 aa2.76□□□□□ -1.97
CSTF3-202ENST00000431742 PRM1P04553 51 aa2.68□□□□□ -1.98
CSTF3-202ENST00000431742 PHGR1C9JFL3 82 aa2.58□□□□□ -2
CSTF3-202ENST00000431742 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
CSTF3-202ENST00000431742 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
CSTF3-202ENST00000431742 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 49.7 ms