RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 LCE5AQ5TCM9 118 aa9.08□□□□□ -0.96
CPNE1-212ENST00000430570 ROMO1P60602 79 aa8.99□□□□□ -0.97
CPNE1-212ENST00000430570 MT1LQ93083 61 aa8.99□□□□□ -0.97
CPNE1-212ENST00000430570 KRTAP12-3P60328 96 aa8.97□□□□□ -0.97
CPNE1-212ENST00000430570 MT1GP13640 62 aa8.95□□□□□ -0.98
CPNE1-212ENST00000430570 LCE3BQ5TA77 95 aa8.93□□□□□ -0.98
CPNE1-212ENST00000430570 KRTAP2-2Q9BYT5 123 aa8.88□□□□□ -0.99
CPNE1-212ENST00000430570 KRTAP2-1Q9BYU5 128 aa8.88□□□□□ -0.99
CPNE1-212ENST00000430570 KRTAP23-1A1A580 65 aa8.86□□□□□ -0.99
CPNE1-212ENST00000430570 MT1MQ8N339 61 aa8.83□□□□□ -1
CPNE1-212ENST00000430570 PP632Q6XCG6 107 aa8.81□□□□□ -1
CPNE1-212ENST00000430570 BRK1Q8WUW1 75 aa8.78□□□□□ -1
CPNE1-212ENST00000430570 DSTQ03001 7570 aaKnown RBP8.73□□□□□ -1.01
CPNE1-212ENST00000430570 KRTAP4-3Q9BYR4 195 aa8.67□□□□□ -1.02
CPNE1-212ENST00000430570 KRTAP4-7Q9BYR0 210 aa8.63□□□□□ -1.03
CPNE1-212ENST00000430570 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
CPNE1-212ENST00000430570 KRTAP19-4Q3LI73 84 aa8.4□□□□□ -1.06
CPNE1-212ENST00000430570 LCE3CQ5T5A8 94 aa8.3□□□□□ -1.08
CPNE1-212ENST00000430570 PMAIP1Q13794 54 aa8.27□□□□□ -1.09
CPNE1-212ENST00000430570 KRTAP4-9Q9BYQ8 210 aa8.22□□□□□ -1.09
CPNE1-212ENST00000430570 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
CPNE1-212ENST00000430570 LCE4AQ5TA78 99 aa8.15□□□□□ -1.1
CPNE1-212ENST00000430570 KRTAP5-4Q6L8H1 288 aa8.12□□□□□ -1.11
CPNE1-212ENST00000430570 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
CPNE1-212ENST00000430570 KRTAP5-5Q701N2 237 aaPredicted RBP8.05□□□□□ -1.12
CPNE1-212ENST00000430570 MT4P47944 62 aa8.04□□□□□ -1.12
CPNE1-212ENST00000430570 PRO0628Q9UI54 55 aa8.03□□□□□ -1.12
CPNE1-212ENST00000430570 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
CPNE1-212ENST00000430570 KRTAP4-6Q9BYQ5 205 aa7.9□□□□□ -1.14
CPNE1-212ENST00000430570 KRTAP9-6A8MVA2 160 aa7.89□□□□□ -1.15
CPNE1-212ENST00000430570 HMCN1Q96RW7 5635 aa7.81□□□□□ -1.16
CPNE1-212ENST00000430570 SYNE1Q8NF91 8797 aaKnown RBP7.75□□□□□ -1.17
CPNE1-212ENST00000430570 KRTAP12-4P60329 112 aa7.67□□□□□ -1.18
CPNE1-212ENST00000430570 MT1AP04731 61 aa7.64□□□□□ -1.19
CPNE1-212ENST00000430570 KRTAP20-2Q3LI61 65 aa7.64□□□□□ -1.19
CPNE1-212ENST00000430570 GPR98Q8WXG9 6306 aa7.62□□□□□ -1.19
CPNE1-212ENST00000430570 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
CPNE1-212ENST00000430570 KRTAP6-1Q3LI64 71 aa7.59□□□□□ -1.19
CPNE1-212ENST00000430570 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
CPNE1-212ENST00000430570 KRTAP5-3Q6L8H2 238 aa7.41□□□□□ -1.22
CPNE1-212ENST00000430570 AHNAK2Q8IVF2 5795 aa7.38□□□□□ -1.23
CPNE1-212ENST00000430570 KRTAP9-4Q9BYQ2 154 aa7.34□□□□□ -1.23
CPNE1-212ENST00000430570 KRTAP5-10Q6L8G5 202 aa7.23□□□□□ -1.25
CPNE1-212ENST00000430570 KRTAP5-2Q701N4 177 aa7.21□□□□□ -1.26
CPNE1-212ENST00000430570 SVIPQ8NHG7 77 aa7.21□□□□□ -1.26
CPNE1-212ENST00000430570 KRTAP6-2Q3LI66 62 aa7.15□□□□□ -1.26
CPNE1-212ENST00000430570 MT3P25713 68 aa6.95□□□□□ -1.3
CPNE1-212ENST00000430570 KRTAP5-7Q6L8G8 165 aa6.86□□□□□ -1.31
CPNE1-212ENST00000430570 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
CPNE1-212ENST00000430570 OBSCNQ5VST9 7968 aa6.67□□□□□ -1.34
CPNE1-212ENST00000430570 KRTAP5-8O75690 187 aa6.62□□□□□ -1.35
CPNE1-212ENST00000430570 LUZP6Q538Z0 58 aa6.5□□□□□ -1.37
CPNE1-212ENST00000430570 KRTAP5-1Q6L8H4 278 aa6.39□□□□□ -1.39
CPNE1-212ENST00000430570 LCE1EQ5T753 118 aa6.25□□□□□ -1.41
CPNE1-212ENST00000430570 MUC5ACP98088 5654 aa6.19□□□□□ -1.42
CPNE1-212ENST00000430570 KRTAP9-9Q9BYP9 154 aa6.15□□□□□ -1.43
CPNE1-212ENST00000430570 LCE3DQ9BYE3 92 aa6.07□□□□□ -1.44
CPNE1-212ENST00000430570 MUC5BQ9HC84 5762 aaPredicted RBP5.95□□□□□ -1.46
CPNE1-212ENST00000430570 KRTAP4-2Q9BYR5 136 aa5.91□□□□□ -1.46
CPNE1-212ENST00000430570 LCE1BQ5T7P3 118 aa5.89□□□□□ -1.47
CPNE1-212ENST00000430570 AHNAKQ09666 5890 aaKnown RBP5.87□□□□□ -1.47
CPNE1-212ENST00000430570 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
CPNE1-212ENST00000430570 LCE1CQ5T751 118 aa5.8□□□□□ -1.48
CPNE1-212ENST00000430570 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
CPNE1-212ENST00000430570 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.35□□□□□ -1.55
CPNE1-212ENST00000430570 KRTAP5-11Q6L8G4 156 aa5.21□□□□□ -1.58
CPNE1-212ENST00000430570 KRTAP4-12Q9BQ66 201 aa5.21□□□□□ -1.58
CPNE1-212ENST00000430570 KRTAP21-2Q3LI59 83 aa4.99□□□□□ -1.61
CPNE1-212ENST00000430570 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
CPNE1-212ENST00000430570 H3BS24 57 aa4.78□□□□□ -1.64
CPNE1-212ENST00000430570 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
CPNE1-212ENST00000430570 PRM1P04553 51 aa4.65□□□□□ -1.67
CPNE1-212ENST00000430570 INE1O15225 51 aa4.62□□□□□ -1.67
CPNE1-212ENST00000430570 KRTAP4-4Q9BYR3 166 aa4.53□□□□□ -1.68
CPNE1-212ENST00000430570 PHGR1C9JFL3 82 aa4.49□□□□□ -1.69
CPNE1-212ENST00000430570 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.75
CPNE1-212ENST00000430570 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
CPNE1-212ENST00000430570 MUC16Q8WXI7 14507 aa2.93□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms