RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 COA5Q86WW8 74 aa3.59□□□□□ -1.83
HDAC9-211ENST00000430454 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
HDAC9-211ENST00000430454 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
HDAC9-211ENST00000430454 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
HDAC9-211ENST00000430454 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
HDAC9-211ENST00000430454 A0A0D9SG42 100 aa3.51□□□□□ -1.85
HDAC9-211ENST00000430454 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
HDAC9-211ENST00000430454 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
HDAC9-211ENST00000430454 A0A1B0GU69 56 aa3.47□□□□□ -1.85
HDAC9-211ENST00000430454 A8MU10 97 aa3.47□□□□□ -1.85
HDAC9-211ENST00000430454 SPATA8Q6RVD6 105 aa3.47□□□□□ -1.85
HDAC9-211ENST00000430454 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
HDAC9-211ENST00000430454 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
HDAC9-211ENST00000430454 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
HDAC9-211ENST00000430454 MT1EP04732 61 aa3.39□□□□□ -1.87
HDAC9-211ENST00000430454 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
HDAC9-211ENST00000430454 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
HDAC9-211ENST00000430454 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
HDAC9-211ENST00000430454 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
HDAC9-211ENST00000430454 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
HDAC9-211ENST00000430454 TNP1P09430 55 aa3.35□□□□□ -1.87
HDAC9-211ENST00000430454 MT1GP13640 62 aa3.34□□□□□ -1.87
HDAC9-211ENST00000430454 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
HDAC9-211ENST00000430454 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
HDAC9-211ENST00000430454 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
HDAC9-211ENST00000430454 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
HDAC9-211ENST00000430454 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
HDAC9-211ENST00000430454 UQCR11O14957 56 aa3.25□□□□□ -1.89
HDAC9-211ENST00000430454 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
HDAC9-211ENST00000430454 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
HDAC9-211ENST00000430454 MT1MQ8N339 61 aa3.23□□□□□ -1.89
HDAC9-211ENST00000430454 MT1LQ93083 61 aa3.23□□□□□ -1.89
HDAC9-211ENST00000430454 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
HDAC9-211ENST00000430454 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
HDAC9-211ENST00000430454 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
HDAC9-211ENST00000430454 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
HDAC9-211ENST00000430454 INE1O15225 51 aa3.14□□□□□ -1.91
HDAC9-211ENST00000430454 MT4P47944 62 aa3.14□□□□□ -1.91
HDAC9-211ENST00000430454 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
HDAC9-211ENST00000430454 MT3P25713 68 aa3.09□□□□□ -1.91
HDAC9-211ENST00000430454 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
HDAC9-211ENST00000430454 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
HDAC9-211ENST00000430454 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
HDAC9-211ENST00000430454 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
HDAC9-211ENST00000430454 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
HDAC9-211ENST00000430454 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
HDAC9-211ENST00000430454 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
HDAC9-211ENST00000430454 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
HDAC9-211ENST00000430454 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
HDAC9-211ENST00000430454 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
HDAC9-211ENST00000430454 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
HDAC9-211ENST00000430454 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
HDAC9-211ENST00000430454 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
HDAC9-211ENST00000430454 MT1AP04731 61 aa2.77□□□□□ -1.97
HDAC9-211ENST00000430454 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
HDAC9-211ENST00000430454 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
HDAC9-211ENST00000430454 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
HDAC9-211ENST00000430454 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
HDAC9-211ENST00000430454 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
HDAC9-211ENST00000430454 KRTAP5-8O75690 187 aa2.57□□□□□ -2
HDAC9-211ENST00000430454 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
HDAC9-211ENST00000430454 MUC5ACP98088 5654 aa2.55□□□□□ -2
HDAC9-211ENST00000430454 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
HDAC9-211ENST00000430454 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
HDAC9-211ENST00000430454 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
HDAC9-211ENST00000430454 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
HDAC9-211ENST00000430454 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
HDAC9-211ENST00000430454 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
HDAC9-211ENST00000430454 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
HDAC9-211ENST00000430454 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
HDAC9-211ENST00000430454 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
HDAC9-211ENST00000430454 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
HDAC9-211ENST00000430454 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
HDAC9-211ENST00000430454 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
HDAC9-211ENST00000430454 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
HDAC9-211ENST00000430454 PRM1P04553 51 aa1.44□□□□□ -2.18
HDAC9-211ENST00000430454 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
HDAC9-211ENST00000430454 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 51.3 ms