RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MT1LQ93083 61 aa5.28□□□□□ -1.56
MSH5-208ENST00000429846 HMCN1Q96RW7 5635 aa5.28□□□□□ -1.56
MSH5-208ENST00000429846 ATP5EP56381 51 aaPredicted RBP5.22□□□□□ -1.57
MSH5-208ENST00000429846 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
MSH5-208ENST00000429846 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
MSH5-208ENST00000429846 C10orf95Q9H7T3 257 aa5.18□□□□□ -1.58
MSH5-208ENST00000429846 H7BZZ5 65 aa5.16□□□□□ -1.58
MSH5-208ENST00000429846 TNP1P09430 55 aa5.16□□□□□ -1.58
MSH5-208ENST00000429846 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
MSH5-208ENST00000429846 A0A1B0GU69 56 aa5.15□□□□□ -1.59
MSH5-208ENST00000429846 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
MSH5-208ENST00000429846 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
MSH5-208ENST00000429846 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
MSH5-208ENST00000429846 A8MU10 97 aa5.1□□□□□ -1.59
MSH5-208ENST00000429846 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
MSH5-208ENST00000429846 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
MSH5-208ENST00000429846 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
MSH5-208ENST00000429846 KRTAP5-7Q6L8G8 165 aa4.96□□□□□ -1.62
MSH5-208ENST00000429846 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
MSH5-208ENST00000429846 PRR15LQ9BU68 103 aa4.95□□□□□ -1.62
MSH5-208ENST00000429846 Q1T7F1 81 aa4.92□□□□□ -1.62
MSH5-208ENST00000429846 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
MSH5-208ENST00000429846 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
MSH5-208ENST00000429846 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
MSH5-208ENST00000429846 V9GYY9 64 aa4.9□□□□□ -1.63
MSH5-208ENST00000429846 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
MSH5-208ENST00000429846 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
MSH5-208ENST00000429846 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
MSH5-208ENST00000429846 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
MSH5-208ENST00000429846 UQCR11O14957 56 aa4.77□□□□□ -1.65
MSH5-208ENST00000429846 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
MSH5-208ENST00000429846 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
MSH5-208ENST00000429846 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
MSH5-208ENST00000429846 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
MSH5-208ENST00000429846 PSPHP1O15172 72 aa4.7□□□□□ -1.66
MSH5-208ENST00000429846 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
MSH5-208ENST00000429846 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
MSH5-208ENST00000429846 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
MSH5-208ENST00000429846 K7ERS5 55 aa4.62□□□□□ -1.67
MSH5-208ENST00000429846 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
MSH5-208ENST00000429846 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
MSH5-208ENST00000429846 A6NED7 52 aa4.6□□□□□ -1.67
MSH5-208ENST00000429846 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
MSH5-208ENST00000429846 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
MSH5-208ENST00000429846 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
MSH5-208ENST00000429846 MT1AP04731 61 aa4.5□□□□□ -1.69
MSH5-208ENST00000429846 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
MSH5-208ENST00000429846 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
MSH5-208ENST00000429846 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
MSH5-208ENST00000429846 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
MSH5-208ENST00000429846 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
MSH5-208ENST00000429846 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
MSH5-208ENST00000429846 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
MSH5-208ENST00000429846 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.73
MSH5-208ENST00000429846 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
MSH5-208ENST00000429846 ROMO1P60602 79 aa4.22□□□□□ -1.73
MSH5-208ENST00000429846 MT3P25713 68 aa4.14□□□□□ -1.75
MSH5-208ENST00000429846 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
MSH5-208ENST00000429846 H3BS24 57 aa4.03□□□□□ -1.76
MSH5-208ENST00000429846 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
MSH5-208ENST00000429846 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
MSH5-208ENST00000429846 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
MSH5-208ENST00000429846 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
MSH5-208ENST00000429846 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
MSH5-208ENST00000429846 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
MSH5-208ENST00000429846 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
MSH5-208ENST00000429846 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
MSH5-208ENST00000429846 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
MSH5-208ENST00000429846 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
MSH5-208ENST00000429846 INE1O15225 51 aa3.14□□□□□ -1.91
MSH5-208ENST00000429846 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
MSH5-208ENST00000429846 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
MSH5-208ENST00000429846 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
MSH5-208ENST00000429846 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
MSH5-208ENST00000429846 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
MSH5-208ENST00000429846 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
MSH5-208ENST00000429846 PRM1P04553 51 aa2.12□□□□□ -2.07
MSH5-208ENST00000429846 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 102.6 ms