RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
R3HDM1-206ENST00000429703 LCE3CQ5T5A8 94 aa1.74□□□□□ -2.13
R3HDM1-206ENST00000429703 TNP1P09430 55 aa1.72□□□□□ -2.13
R3HDM1-206ENST00000429703 KRTAP19-2Q3LHN2 52 aa1.72□□□□□ -2.13
R3HDM1-206ENST00000429703 LCE3AQ5TA76 89 aa1.7□□□□□ -2.14
R3HDM1-206ENST00000429703 KRTAP6-3Q3LI67 103 aa1.7□□□□□ -2.14
R3HDM1-206ENST00000429703 KRTAP4-1Q9BYQ7 146 aa1.66□□□□□ -2.14
R3HDM1-206ENST00000429703 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.14
R3HDM1-206ENST00000429703 NEBP20929 6669 aa1.65□□□□□ -2.15
R3HDM1-206ENST00000429703 MT1HP80294 61 aa1.65□□□□□ -2.15
R3HDM1-206ENST00000429703 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.15
R3HDM1-206ENST00000429703 KRTAP10-5P60370 271 aa1.65□□□□□ -2.15
R3HDM1-206ENST00000429703 KRTAP2-4Q9BYR9 128 aa1.65□□□□□ -2.15
R3HDM1-206ENST00000429703 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
R3HDM1-206ENST00000429703 FSIP2Q5CZC0 6907 aa1.62□□□□□ -2.15
R3HDM1-206ENST00000429703 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
R3HDM1-206ENST00000429703 KRTAP9-6A8MVA2 160 aa1.62□□□□□ -2.15
R3HDM1-206ENST00000429703 LCE3EQ5T5B0 92 aa1.59□□□□□ -2.15
R3HDM1-206ENST00000429703 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
R3HDM1-206ENST00000429703 KRTAP10-7P60409 375 aaPredicted RBP1.58□□□□□ -2.16
R3HDM1-206ENST00000429703 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
R3HDM1-206ENST00000429703 M0R2T5 61 aa1.56□□□□□ -2.16
R3HDM1-206ENST00000429703 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
R3HDM1-206ENST00000429703 USH2AO75445 5202 aa1.55□□□□□ -2.16
R3HDM1-206ENST00000429703 SYNE2Q8WXH0 6885 aaKnown RBP1.55□□□□□ -2.16
R3HDM1-206ENST00000429703 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
R3HDM1-206ENST00000429703 MT2AP02795 61 aa1.52□□□□□ -2.17
R3HDM1-206ENST00000429703 SPRR2GQ9BYE4 73 aa1.5□□□□□ -2.17
R3HDM1-206ENST00000429703 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
R3HDM1-206ENST00000429703 LCE1EQ5T753 118 aa1.5□□□□□ -2.17
R3HDM1-206ENST00000429703 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
R3HDM1-206ENST00000429703 MT1FP04733 61 aa1.49□□□□□ -2.17
R3HDM1-206ENST00000429703 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-206ENST00000429703 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
R3HDM1-206ENST00000429703 MT1XP80297 61 aa1.46□□□□□ -2.18
R3HDM1-206ENST00000429703 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
R3HDM1-206ENST00000429703 KRTAP19-8Q3LI54 63 aa1.45□□□□□ -2.18
R3HDM1-206ENST00000429703 KRTAP5-9P26371 169 aa1.45□□□□□ -2.18
R3HDM1-206ENST00000429703 KMT2DO14686 5537 aa1.45□□□□□ -2.18
R3HDM1-206ENST00000429703 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
R3HDM1-206ENST00000429703 MACF1Q9UPN3 7388 aaKnown RBP1.42□□□□□ -2.18
R3HDM1-206ENST00000429703 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
R3HDM1-206ENST00000429703 LCE3DQ9BYE3 92 aa1.4□□□□□ -2.18
R3HDM1-206ENST00000429703 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.18
R3HDM1-206ENST00000429703 KRTAP5-5Q701N2 237 aaPredicted RBP1.39□□□□□ -2.19
R3HDM1-206ENST00000429703 MT1BP07438 61 aa1.39□□□□□ -2.19
R3HDM1-206ENST00000429703 KRTAP5-4Q6L8H1 288 aa1.39□□□□□ -2.19
R3HDM1-206ENST00000429703 PRM1P04553 51 aa1.36□□□□□ -2.19
R3HDM1-206ENST00000429703 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
R3HDM1-206ENST00000429703 SPRR2EP22531 72 aa1.33□□□□□ -2.2
R3HDM1-206ENST00000429703 SPRR2BP35325 72 aa1.33□□□□□ -2.2
R3HDM1-206ENST00000429703 SPRR2AP35326 72 aa1.33□□□□□ -2.2
R3HDM1-206ENST00000429703 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
R3HDM1-206ENST00000429703 SPRR2DP22532 72 aa1.31□□□□□ -2.2
R3HDM1-206ENST00000429703 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
R3HDM1-206ENST00000429703 MUC12Q9UKN1 5478 aa1.28□□□□□ -2.2
R3HDM1-206ENST00000429703 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
R3HDM1-206ENST00000429703 MT1LQ93083 61 aa1.27□□□□□ -2.21
R3HDM1-206ENST00000429703 MT1AP04731 61 aa1.23□□□□□ -2.21
R3HDM1-206ENST00000429703 KRTAP4-3Q9BYR4 195 aa1.23□□□□□ -2.21
R3HDM1-206ENST00000429703 MT1EP04732 61 aa1.22□□□□□ -2.21
R3HDM1-206ENST00000429703 KRTAP6-2Q3LI66 62 aa1.22□□□□□ -2.21
R3HDM1-206ENST00000429703 SPRR2FQ96RM1 72 aa1.21□□□□□ -2.22
R3HDM1-206ENST00000429703 MT1GP13640 62 aa1.2□□□□□ -2.22
R3HDM1-206ENST00000429703 KRTAP5-8O75690 187 aa1.19□□□□□ -2.22
R3HDM1-206ENST00000429703 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
R3HDM1-206ENST00000429703 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
R3HDM1-206ENST00000429703 KRTAP19-3Q7Z4W3 81 aa1.15□□□□□ -2.23
R3HDM1-206ENST00000429703 KRTAP6-1Q3LI64 71 aa1.11□□□□□ -2.23
R3HDM1-206ENST00000429703 MT4P47944 62 aa1.1□□□□□ -2.23
R3HDM1-206ENST00000429703 MT1MQ8N339 61 aa1.1□□□□□ -2.23
R3HDM1-206ENST00000429703 KRTAP20-2Q3LI61 65 aa1.03□□□□□ -2.24
R3HDM1-206ENST00000429703 LCE1CQ5T751 118 aa0.99□□□□□ -2.25
R3HDM1-206ENST00000429703 LCE1BQ5T7P3 118 aa0.99□□□□□ -2.25
R3HDM1-206ENST00000429703 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
R3HDM1-206ENST00000429703 PHGR1C9JFL3 82 aa0.84□□□□□ -2.28
R3HDM1-206ENST00000429703 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
R3HDM1-206ENST00000429703 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 157 ms